Variovorax paradoxus B4: VAPA_1c42940
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Entry
VAPA_1c42940 CDS
T02835
Name
(GenBank) mechanosensitive ion channel family protein
KO
K05802
potassium-dependent mechanosensitive channel
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c42940
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c42940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
DUF3772
MS_channel_3rd
OHCU_decarbox
ATG16
Motif
Other DBs
NCBI-ProteinID:
AGU51370
UniProt:
T1XGW1
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All DBs
Position
1:4553940..4556384
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AA seq
814 aa
AA seq
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MMAAMPSIPRLIAFCLAALLLCGAATAQPGNSSSSTTAIAAAAAPAPEPTVAELREQLTK
ITAAADSTEDMRQLLAQINDIGTQADKFVAARASELADLNARLGELGNPPAAGATEDPDI
TRQRARLTKERNALDADIRLARLLSIDVRQRGAELVTERRALFEAQITERAPSPLTGEFW
LDLREAWPNDLARLKTMVSGLRDGLAQAMEQGPRMAVLGALILAVLLAVLGTWVAEHLLT
RIAARLLPAGRLRRSLLVIAVVASHVLLVAVAAHGFVWVLEEYATWEPQARKAMRSMAQA
LVFMAFVIGLGRGLLATSRPSWRLPPIPDAMATRLAPLPWLVAMVAALAWAPVEINALVE
ASFAAVVATHVLTALVLTALVGAVLHRLRPMRADTPDADPPERPMWVGLLVACIGVLMVA
IWVLVGVGYVALASFLASQLTWSGIVAAAFYVLFKFADDVFMAGVSSRSTFGQRLQKSFG
LAPQTLDQAATVLSGLSRVALFFYMLIALAAPLGTGPSEVFQRSGKFGTGVKVGEFQLVP
GAILSAIAVAVIGFIVLRVFKRWLARSYLPSTQFEPGMQSSITTLLGYVGGILVVAFSLS
ALGIGIERIAWVASALSVGIGFGLQAIVQNFISGLILLAEQPVKVGDWVVLGTTEGDVRR
INVRATEIQLGDRSTVIVPNSEFITKTVRNMTLTNAEGRVLIRLPMPLTTNAQRVRELIL
DACRAHESVLETPAPSLTLEGIEGGLLMFQAIAYVPSPRLAGSVRSDLLFTILERLDAEQ
LPLAPYAAAPAPMPASVPAPMPGPVAADGATPAA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagccatgccttcgattccccgcctgattgccttctgcctggctgccctgctg
ctctgcggtgccgcgacggcgcagccgggcaacagcagcagcagcaccaccgccatcgcc
gctgccgcggcaccggcgcccgaacccacggtggccgagctgcgcgagcagctcacgaag
atcaccgccgccgccgattccaccgaggacatgcgccagctgctggcgcagatcaacgac
atcggcacgcaggccgacaagttcgttgccgcacgcgccagcgagctggccgacctgaac
gcccgcctcggcgagctcggaaatccgccggccgcgggcgccaccgaagaccccgacatc
acgcgccagcgcgcccgcctcacgaaggaacgcaacgcgctggacgccgacatccggctg
gcacggctgctgtccatcgacgtgcggcagcgcggcgccgaactggtgaccgagcgccgc
gcgctcttcgaagcgcagatcaccgagcgcgcgccctccccgctcaccggcgagttctgg
ctcgatctgcgggaggcctggccgaacgatctggcgcgcctgaagacgatggtgtccggc
ctgcgcgacgggctggcgcaagccatggagcaagggccccggatggcggtgctcggggcg
ctgatcctggcggtgctgctcgcggtgctcggcacctgggtggccgagcatctgctgacc
cggatcgccgctcggctgctgccggcgggccggctgcggcgttcgctgctggtgattgcc
gtcgtggcgagccatgtgctgctggtggccgttgcggcgcacggcttcgtgtgggtgctc
gaggaatacgccacctgggagccgcaggcgcgcaaggcgatgcgttcgatggcgcaggcg
ctggtgttcatggccttcgtcatcggactgggccgcggactgctggccaccagccgcccg
tcgtggcggctgccgccgattcccgacgccatggccacccgcctcgcaccgctgccgtgg
ttggtggcgatggtggctgcgctggcctgggcgccggtcgagatcaatgcgctggtcgaa
gccagcttcgcggccgtggttgccacgcacgtgctcaccgcgctggtgctcaccgcgctc
gttggcgcggtgctccatcggctccggccaatgcgcgccgatacgccggacgccgatccg
ccggagcggccgatgtgggtgggcctgttggtggcctgcatcggcgtgctgatggtggcc
atctgggtgctggtgggggtgggctacgtggcgctcgcgagcttcctagcctcgcagctc
acctggagcggcatcgtcgcggccgccttctacgtcctgttcaagtttgccgacgacgtc
ttcatggccggcgtgtcctcgcgcagcactttcggccagcgcctgcagaagagcttcggc
ctggcgccgcagacgctcgaccaggcggccaccgtgctctccggcctgagccgggtggcg
ctgttcttctacatgctgatcgcgctcgcggcgccgttgggcaccggtcccagcgaagtg
ttccagcgcagcggcaagttcggcaccggcgtgaaggtgggcgagttccagctggtgccg
ggcgccatcctgagcgccatcgccgtggcggtgatcggcttcatcgtgctcagggtcttc
aagcgctggctcgcgcgcagctacctgcccagcacgcagttcgagccgggcatgcagagc
tcgatcaccacgctgctcggctatgtgggcggcatcctggtggtcgcgttctcgctgtcg
gcgctgggcatcggcatcgagcgcatcgcgtgggtggcgagcgcgctgtcggtgggcatc
ggcttcggcctgcaggccatcgtgcagaacttcatctcgggcctcatcctgctggccgag
cagccggtgaaggtgggcgactgggtggtgctgggcaccaccgagggcgacgtgcggcgc
atcaacgtgcgcgccacggagatccagctcggggaccgctcgacggtgatcgtgccgaac
tccgagttcatcacgaagaccgtgcgcaacatgacgctgaccaacgcggagggccgggtg
ctgatccggctgccgatgccgctgaccaccaacgcgcagcgcgtgcgcgagctcatcctg
gacgcctgccgcgcccacgaaagcgtgctggaaacgccggcgccttcgctcacgctcgaa
ggcatcgagggcggcctgctcatgttccaggccattgcctatgtgccgagcccgcgcctg
gcgggcagcgtgcgcagcgacctgctgttcaccatcctggagcgcctggatgcggagcag
ctgccgctggcgccgtatgcggcggcgcctgcgccaatgcctgcgtccgtgcccgcgccc
atgcccgggccggttgccgcggacggcgccaccccagccgcctga
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