Variovorax paradoxus B4: VAPA_1c43250
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Entry
VAPA_1c43250 CDS
T02835
Symbol
fliF
Name
(GenBank) flagellar M-ring protein FliF
KO
K02409
flagellar M-ring protein FliF
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VAPA_1c43250 (fliF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c43250 (fliF)
02035 Bacterial motility proteins [BR:
vpd02035
]
VAPA_1c43250 (fliF)
Secretion system [BR:
vpd02044
]
Type III secretion system
Flagellar export apparatus
VAPA_1c43250 (fliF)
Bacterial motility proteins [BR:
vpd02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
VAPA_1c43250 (fliF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
Motif
Other DBs
NCBI-ProteinID:
AGU51401
UniProt:
T1XFV3
LinkDB
All DBs
Position
1:4584927..4586606
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AA seq
559 aa
AA seq
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MSSAAPAGASPAPSPASGLAERLRTQPKLPLIVGAAAIAAAAAAFLLWSRAPDYGVLYTN
VTDRDGGAIIASLQQMNVPYKFAEGGGAILVARDKVPEVRLKLASQGLPKGGGVGFELMD
NQKFGTSNFAEQVNYQRGLEGELARSVESIGSVESARIHLALPKPSLFVRDQKKPSASVI
LTLHRGRSIDEGQVSAIVHMVSSSVPELNAKSVTVVDQHGNLLSAANAGARGLDVSQLKY
AQEIEQGYIRRIEAILQPIVGASNVRAQVAADIDFSVVERTEESYKPNQDPRAAAIRSQQ
SSESAQQGATPPGGVPGALSNQPPQTPSAPITAPPAAANAAAPAPGAATVVASSAPGSSR
KDVTTNYELDRSIRHVQQGAGGVKRLSVAVVVNHREAADSAGKLSQRALTPAEIEQIRNL
AKEAMGFSQERGDSLNVVNSAFAREGRDEQPGPVLPFWRDPANLGLAMTIAQYLLLAGLA
LFAWFAVLRPLLRKHLAPPAAAVPDAAAAHGAADDETVSQDNARLREIERQKADLDYAHQ
TADQDPRLVATLIKHWMNS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggcggcacccgcgggcgccagcccggcgccctcgcccgcctccggccttgcc
gagcggcttcgcacccagccgaagctgccgctgatcgtcggcgcggccgccatcgccgcg
gccgccgcggcgttcctgctctggagccgcgccccggactacggcgtgctctacaccaac
gtgacggaccgcgacggcggcgccatcatcgcgtcgctgcagcagatgaacgtgccctac
aagttcgccgaaggcggcggcgcgatcctggtggcgcgcgacaaggtgcctgaagtgcgc
ctgaagctcgcgtcccagggcctgccgaagggcggaggggtcggcttcgagctgatggac
aaccagaagttcggcaccagcaatttcgcagaacaggtcaactaccagcgcgggctcgaa
ggcgagctggcgcgctcggtcgaatcgatcggctcggtcgagtcggcgcgcatccacctg
gccctgcccaagccttcgctcttcgtgcgcgaccagaagaagccctcggcctcggtgatc
ctgacgctgcaccgcggccgcagcatcgacgaaggccaggtcagcgccatcgtgcacatg
gtctccagcagcgtgcccgaactcaacgccaagagcgtgaccgtggtcgaccagcacggc
aacctgctgtcggccgccaatgccggcgcgcgcggcctggacgtgagccaactgaagtac
gcacaggaaatcgagcagggctacatccgccgcatcgaggcgatcctgcagcccatcgtg
ggcgcgagcaatgtgcgcgcgcaggtcgcggccgacatcgatttctccgtggtcgaacgc
accgaggaaagctacaagccgaaccaggacccgcgtgccgcggccatccgcagccaacag
tcgagcgagtcggcgcagcagggcgccacgccgccgggcggcgtgccgggcgcgttgtcg
aaccagccgccgcagacgccgagcgcgcccatcaccgcgccgccggcggctgcgaacgcc
gccgcacctgcgccgggcgcggccacggtggtggccagctcggcaccgggcagctcgcgc
aaggacgtgacgaccaactacgagctcgatcgttcgatccgccatgtgcagcaaggcgcg
ggcggcgtgaagcggctgtcggtggccgtggtggtgaaccaccgcgaggccgcggacagt
gccggcaagctgagccagcgcgcgctcacgccggccgagatcgagcagatcaggaacctg
gccaaggaagcgatgggcttcagccaggagcgcggcgactcgctcaacgtggtcaacagc
gccttcgcccgcgaaggccgcgacgagcagcccgggcccgtcctgccgttctggcgcgac
cccgccaacctcgggctcgccatgaccatcgcgcagtacctgctgcttgccggcctcgcg
ctgttcgcctggttcgcggtgctgcggccgctgctgcgcaagcacctcgcgccgcctgcc
gccgccgtgcccgacgcggcggcggcccacggcgcggccgacgacgaaacggtttcccag
gacaacgcgcggctgcgcgagatcgagcgccagaaggccgacctcgactacgcgcaccag
accgccgaccaggacccgcgcctggtggccacgttgatcaagcattggatgaactcatga
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