Variovorax paradoxus B4: VAPA_1c43780
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Entry
VAPA_1c43780 CDS
T02835
Symbol
pilB
Name
(GenBank) type 4 fimbrial assembly protein PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c43780 (pilB)
02035 Bacterial motility proteins [BR:
vpd02035
]
VAPA_1c43780 (pilB)
Secretion system [BR:
vpd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
VAPA_1c43780 (pilB)
Bacterial motility proteins [BR:
vpd02035
]
Pilus system
Pilus assembly proteins
VAPA_1c43780 (pilB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
HerA_C
AAA_30
AAA_19
nSTAND3
AAA_7
ATPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AGU51453
UniProt:
T1XFX2
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All DBs
Position
1:4634871..4636604
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AA seq
577 aa
AA seq
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MAAAELPVKENTQIALPGLARALVSAGKLPAKTAEDIYQKSLNGRTSFIAELTGSGAVSA
ADLAHTLSSAFGAPLLDLDAIDHQRLPKDLLDPKLCHAYRIVVLSKRNNRLIVATADPSD
QQAVEKIKFASQMGVDWVIAEYDKLSRMIEAAAVSAAETINSIVGAEFEFDDVTADTSGD
ANEQAIAEVEDAPVVRFLHKMLLDGVSMRASDIHFEPYEHNYRVRFRIDGELREIASPPT
LIKDKLASRIKVISRLDISEKRVPQDGRMKLKIGPDRVIDFRVSTLPTLFGEKIVIRILD
PSSARLGIDALGYDADEKERLLHAIGRPYGMVLVTGPTGSGKTVSLYTCLNLLNQPGVNI
ATAEDPSEINLPGVNQVNVNERAGLTFATALRAFLRQDPDIIMVGEIRDLETADISIKAA
QTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCHMCRAPADVPR
QALLDAGFREEQLDGTWKPYRPVGCAACSNGYKGRVGIYQVMPISDAIQTIILRDGSAQD
IARQSEAEGVRSLRQSGLRKVMQGLTSLEEVVAVTNE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgaacttcctgttaaagaaaacacgcaaatcgccctcccgggccttgcg
cgcgccttggtttcggccggcaagcttcccgcgaagactgcggaagacatctaccagaag
tcgctcaacggccgcaccagcttcattgccgagctgaccggcagcggcgccgtctcggcc
gccgacctcgcccatacgctttccagcgccttcggcgcgccgctgctggacctggacgcc
atcgaccaccagcgcctgcccaaggacctgcttgacccgaagctgtgccacgcctaccgg
atcgtggttctcagcaagcgcaacaaccgtctcattgttgcaacggccgacccctcggac
cagcaggcggtggaaaagatcaagttcgcgtcccagatgggcgtggactgggtcattgcc
gaatacgacaagctgtcgcgcatgatcgaagccgccgcggtcagcgcggcggaaaccatc
aacagcatcgtcggcgccgagttcgagttcgacgacgtcacggcggacacctcgggcgac
gccaacgaacaggcgattgccgaagtcgaggacgcgccggtcgtgcgcttcctgcacaag
atgctgctcgacggcgtcagcatgcgggcctcggacatccacttcgagccctacgagcac
aactaccgcgtgcgctttcgcatcgacggcgagctgcgcgagatcgcgagcccgcccacg
ctcatcaaggacaagctggcctcgcggatcaaggtcatttcacggctcgacatttccgag
aagcgcgtgccgcaggacggccgcatgaagctcaagatcggtcccgaccgggtcatcgac
ttccgcgtcagcacgctgcccacgctgttcggcgagaagatcgtgatccgtattctcgac
ccgagcagcgcgcgcctgggcatcgacgccctgggctacgacgccgacgaaaaggagcgc
ctgctgcatgcgatcgggcggccctacggcatggtgctggtgacgggccccaccggttcg
ggcaagacggtttcgctctacacctgcctgaacctgctgaaccagccgggcgtcaacatc
gcaacggcggaagatccttccgaaatcaacctgccgggcgtgaaccaggtgaacgtcaac
gagcgtgccggactcaccttcgccacggcgctgcgcgccttcctgcggcaggatcccgac
atcatcatggtcggcgaaatccgggacctcgaaaccgccgacatctcgatcaaggccgcg
caaacgggccacctggtcctctcgacgctgcacaccaacgacgcgccgaccacgctcacg
cgcatgcggaacatgggcattgcgccgttcaacattgcctccagcgtgatcctcatcacc
gcgcagcggctcgcgcggcgcctgtgccacatgtgccgcgcgccggccgacgtgccgcgc
caggcgctgctcgatgcgggcttcagggaagaacagctcgacggtacctggaagccctat
cggccggtcggctgcgcggcgtgcagcaacggctacaagggccgggtcggcatctaccag
gtgatgccgatctcggacgccatccagaccatcatcctgcgcgacggcagcgcacaggac
atcgcgcgacagtccgaggccgagggcgtgcgctcgctgcggcagtccgggctgcgaaaa
gtcatgcaagggctcacctcactcgaagaagtggtggcggtcaccaacgaataa
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