Variovorax paradoxus B4: VAPA_1c43790
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Entry
VAPA_1c43790 CDS
T02835
Symbol
pilC
Name
(GenBank) putative type 4 fimbrial assembly protein PilC
KO
K02653
type IV pilus assembly protein PilC
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c43790 (pilC)
02035 Bacterial motility proteins [BR:
vpd02035
]
VAPA_1c43790 (pilC)
Secretion system [BR:
vpd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
VAPA_1c43790 (pilC)
Bacterial motility proteins [BR:
vpd02035
]
Pilus system
Pilus assembly proteins
VAPA_1c43790 (pilC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF4536
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
AGU51454
UniProt:
T1XGI2
LinkDB
All DBs
Position
1:4636634..4637863
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AA seq
409 aa
AA seq
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MATVASTRTSNTLKEFVYEWEGKDRNGKLVRGELRAAGENQVQAALRRQGVLASKIKKRR
MRSGKSIKPKDIAIFTRQLATMMKAGVPLLQSFDIVGRGNANPSVAKLLNDIRSDVETGT
SLSAAFRKFPKYFDNLYCNLVEAGEAAGILEDLLDRLATYMEKTEAIKSKIKSALMYPTS
VVVVAFVVVAIIMIFVIPAFKQVFTSFGADLPAPTLFVMAMSEFFVSYWWLIFGVIGGGT
YFFLQAWKRNERVQRVMDRALLRVPIFGTLIEKSCVARWTRTLATMFAAGVPLVEALDSV
GGASGNTVYGDATAKIQQEVSTGTSLTTAMTNVNLFPSMVIQMTAIGEESGSIDHMLGKA
ADFYESEVDDMVAGLSSLMEPIIIVFLGVIIGGIVVSMYLPIFKLGQVV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtggcatccacccgcacctcgaacacgctcaaggaatttgtctacgagtgg
gaaggcaaggaccgcaacgggaagctggtgcgcggcgagcttcgggccgccggcgagaac
caggtgcaggccgccctgcggcgccagggcgttctggcgtccaagatcaagaagcgccgc
atgcgctcgggcaagtccatcaagcccaaggacattgcgatcttcacgcgccagctggca
acaatgatgaaggccggcgtgccgctgctgcagtcgttcgacatcgtgggccgcggcaat
gccaacccgagcgtggccaagctgctcaacgacatccgcagcgacgtggagaccggcacc
tcgctgtcggcggccttccgcaagtttccgaagtatttcgacaacctctactgcaacctg
gtggaggccggcgaagcggccggtatcctggaagacctgctggaccgcctggccacctac
atggagaagaccgaggccatcaagtcgaagatcaagtcggcgctgatgtatcccacctcc
gtggtggtggtcgcgttcgtggtggtggccatcatcatgatcttcgtgattccggccttc
aagcaggtgttcacctccttcggcgccgacctgcccgcacccacgctgttcgtgatggcc
atgagcgaattcttcgtctcctactggtggctgatcttcggcgtgatcggcggcggcacc
tactttttcctgcaggcctggaagcgcaacgaacgcgtgcagcgggtcatggaccgcgcg
ctgctgcgcgtgccgatcttcggcacgctgatcgagaaatcgtgcgtggcccgctggacc
cgcacccttgccaccatgtttgccgccggcgttccgctggtcgaggcactcgactcggtg
ggcggcgcttcgggcaacaccgtctacggcgacgccacggccaagatccagcaggaggtc
tcgaccggcacgagcctcacgacggccatgaccaacgtcaacctgttcccctcgatggtg
atccagatgacggccatcggcgaagagtccggctccatcgaccacatgctcggcaaggcc
gccgacttctacgagtccgaggtggacgacatggtggccggcctctcgagcctgatggag
cccatcatcatcgtgttcctgggcgtgatcatcggcggcatcgtggtgtcgatgtacctg
cccatcttcaagttgggccaggtcgtttga
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