Variovorax paradoxus B4: VAPA_1c45080
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Entry
VAPA_1c45080 CDS
T02835
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase MutY
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VAPA_1c45080 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpd03400
]
VAPA_1c45080 (mutY)
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
VAPA_1c45080 (mutY)
DNA repair and recombination proteins [BR:
vpd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VAPA_1c45080 (mutY)
Prokaryotic type
VAPA_1c45080 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AGU51578
UniProt:
T1XGC0
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All DBs
Position
1:complement(4757226..4758290)
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AA seq
354 aa
AA seq
DB search
MPAAAVESQAPADFAGRIVAWQRSHGRSELPWQNTRDPYRVWLSEVMLQQTQVSTVLGYF
ARFLERFPTVRALADGTEDEVFGLWSGLGYYSRARNMHRCAQEVVARFGGEFPRTAAELE
TLPGIGRSTSAAIAAFCFGERVAILDGNVKRVLTRVLGFGGDMSSSAQERALWDRATQLL
PPAEQKEAIASYTQGVMDLGATVCLPRKPSCMICPLDKTCVGLREGQPERYPVKTRKLKR
SAQSLWALLARDAQGRVWLEKRPAKGIWAGLYCLPVFESREDLLAALPPAALADAQDLPP
FVHVLTHKDLHLHPVMLQGSQPQGDAARWVDAEEWGRLGLPAPMRKLLESSSAG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgccggctgcggccgtggagtcgcaggcgccggccgatttcgccgggcgcatcgtggcc
tggcagcgcagccacggacgcagcgagctgccgtggcagaacacgcgggatccctatcgc
gtgtggctgtcggaggtcatgctccagcagacccaggtttcgaccgtgctcgggtacttt
gcgcgctttctcgaacgctttccgaccgtgcgggccttggccgacggcaccgaggacgag
gttttcggcctctggagcggcctcggctactacagccgcgcccgcaacatgcaccgttgt
gcgcaggaggtggtggcacgtttcggcggcgaatttccgcgcacggccgccgagctcgag
actttgcccggcatcggccgttccacctccgcggcgatcgcggccttctgcttcggagag
cgggtcgcaattctcgacggcaacgtcaagcgcgtgctgacgcgcgtcctcggctttggc
ggcgacatgtcctcgtcggcacaggagcgcgcgctgtgggaccgggccacgcagctgctt
ccgccggccgagcagaaagaagccatcgcgagctacacgcaaggagtgatggacctgggc
gccacggtctgcctgccgcgcaagccgagctgcatgatctgtccgctggacaagacatgc
gtggggctgcgcgagggccagccggaacgctatcccgtcaagacccgcaagctgaagcgc
agcgcgcagtcgctctgggcgctgctcgcgcgcgacgcgcaaggccgtgtctggctggaa
aaacggccggcaaagggcatctgggccgggctctactgcctgcccgtgttcgagagccgc
gaagacctgctggccgcgctgccgccggcggcgctggccgacgcacaggatctgccgccc
ttcgtgcatgtgctgacccacaaggacctgcaccttcacccggtgatgctccaaggcagc
cagccgcagggcgatgccgcgcgctgggtggatgccgaagagtggggccgcctggggttg
ccggcaccgatgcgcaagctgctggagagcagtagcgcgggctag
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