KEGG   Variovorax paradoxus B4: VAPA_1c46400
Entry
VAPA_1c46400      CDS       T02835                                 
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
  KO
K00449  protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00362  Benzoate degradation
vpd00624  Polycyclic aromatic hydrocarbon degradation
vpd01100  Metabolic pathways
vpd01120  Microbial metabolism in diverse environments
vpd01220  Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    VAPA_1c46400 (pcaH)
   00624 Polycyclic aromatic hydrocarbon degradation
    VAPA_1c46400 (pcaH)
Enzymes [BR:vpd01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.3  protocatechuate 3,4-dioxygenase
     VAPA_1c46400 (pcaH)
SSDB
Motif
Pfam: Dioxygenase_C PCDO_beta_N CarboxypepD_reg
Other DBs
NCBI-ProteinID: AGU51708
UniProt: T1XGM9
LinkDB
Position
1:4886438..4887163
AA seq 241 aa
MLTKTSASPAILTPRDWEAHPSYIYPGYKSTAKRGPQKPLVPLKASLGELQQPVYGHDSI
GELDHDLTRNARRNGEPLGERMILTGQVLDERRRPVANTLVELWQANAAGRYVHKVDQHD
APLDPNFLGAGRCLTDSEGRYRFLTIKPGAYPWGNHPNAWRPQHIHMSLFGQSFASRLVT
QMYFPGDPLLQYDPMVTGTPERYRNRLIADFSLDITEEGYALGYQFDIVLRGADETPFEN
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttgacgaaaacatcggcttcccccgccatcctcaccccccgcgactgggaagcccat
ccctcgtacatctaccccggctacaagtcgaccgcgaagcgcggcccgcagaagcccctg
gtcccgctgaaggcctcgctcggcgagctgcagcagccggtctacggccacgacagcatc
ggcgagctcgaccatgacctgacgcgcaatgcgcgcaggaacggcgagccgctgggcgaa
cgcatgatcctcaccggccaggtgctcgacgagcgccgccgccccgtggccaacacgctg
gtcgagctctggcaggccaatgccgccggccgctacgtgcacaaggtcgaccagcacgac
gcgccgctggaccccaacttcctgggcgcgggccgctgcctgaccgacagcgagggccgc
taccgcttcctcaccatcaagcccggcgcctatccctggggcaaccaccccaacgcctgg
cgcccgcagcacatccacatgtcgctgttcggccagagctttgccagccggctggtcacg
cagatgtacttccccggcgatccgctgctgcagtacgaccccatggtcaccggcacgccc
gagcgctaccgaaaccggctgattgccgatttcagcctcgacatcaccgaggaaggctac
gcgctgggctaccagttcgacatcgtgctgcgcggcgccgacgaaacaccctttgagaac
cgctga

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