Variovorax paradoxus B4: VAPA_1c46480
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Entry
VAPA_1c46480 CDS
T02835
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c46480
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c46480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AGU51716
UniProt:
T1XGS7
LinkDB
All DBs
Position
1:4893675..4897757
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AA seq
1360 aa
AA seq
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MQTDAEPQPKPPVRARRSRTRRALRALGWMVAGLLALVLAIGAGAWWWIGSNQSLAFALA
KAARYLPAGQTLESREVTGSLRTGGRIGWLRWQSEKLAVEVQEADVGWQLAPLFQRKLQL
GEVHAARLLIERRGPPSDTPTEPLEQLALPIEVELPFRIDELRWAGPPALQANQLKGSYR
YTGTEHQLEVKGVDIADGHYSARVKLQGPAPMALGATLDGRVKAPLAEDRSIEVLAEAAI
KGNLAGTDARLQVAAELKPAEPDAEAPMEAKLQARIAPWLPQPVIDAKADLRNVDAASLW
PGAPRTRLTGTVELQPDAATGPAAWQASASIRNALPGPWDKGALPLEQVEARVGFDGTNW
TIPEATLRAGGGRIDAEGRWSPAPAPWQARTTVRGVRPGLLHSELSGAPINGTATAQQRE
DTIGFELALRAEGGAGSAAMPGFGLGRVLAQGQWKNQVLDLRTLRLEAERASIEGRLQVR
VAEQAASGKLDLALPGGVAQLEGRIAPAQGAGDIKARIDDAETVQRWIEALPELSKVFAG
KTAKGSARLDASWQGGWQTIQRRLENPNAPAQRGVVEPSLKASLGVPRLELRMPAATGNA
AATTVQLKDLRADLAGSLAQATLALQGEATTGTQKLTLDARASGGLAGTNQWRAALASLR
LQAQDSARPATASAPWTLELGREVTATIKTSGSGTASRLDLEASAAAATLRGPAPGTVRI
EWQPLRFSRSGVAPNQAFRVQSQGKLQGLPMAWAEAFGASATFNELGVSGDLMFDGDWDI
DAGDTLRAHARLARQSGDIRVQAGEAALVTRITSRGTGTASERTMNSATAQGTTAPSTPA
GLRQAELRLDAQGEAVRATLAWDSERAGKINAELNTRMQQRAGGWQWAPDAQLAGNVKAT
LPNLGVWSMLAPPGWRVAGTLDADAALSGNRAAPRWNGTLGADKLALRAPVEGLDLRDGR
LRATLTGERIEITEFTLKGGTGSTVRIAGQSGNRSTAASEAASDGGSLSARGDMAWGAAG
ASGTGIRMALQADLRALRVLVRTDRQVTLSGNLQARLDGGQFNVRGKLRTDRAVIILPDE
TAPSLGTDVVVRSAAKDREMAEQARRDAARNEAQAAKPQTAKPPDIAVNFDLGDDFAVQG
RGITTRLEGDLEIRSTRLDAPPRITGEVKTVRGQYRAYGQQLDVETGVARFNGPFDNPAL
DILAIRPNISQRAGVQITGSAQSPRVKLYSEPALPDAEALSWVVLGRASATSGGESALLQ
QAALALIGHVSKGTSGGSLASRFGLDELGFKGPGNGGDLRESAVTLGKRLSKDFYLTYER
SLGGTFGTIFIFYDLTQRLTLRGQAGQTSGLDLIYTLKYD
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgacgccgaaccccagcccaagcctcctgtgcgcgcacgacgctcgcgcacg
cggcgcgcgctgcgtgcgctggggtggatggtcgcgggcctgctcgcgctggtgctcgcg
atcggcgcgggtgcgtggtggtggatcggttccaaccagtcgctggccttcgcgctcgcc
aaggccgcgcgctacctgcccgccggccagaccctcgaaagccgcgaagtcacgggctcg
ctgcgcaccggcgggcgcatcggctggctgcgctggcaaagcgagaaactggcggtcgag
gtgcaagaggcggacgtcggctggcagctggcgccgctgttccagcgcaagctgcagctc
ggcgaggtgcacgcggcgcggctgctgatcgagcgccgcggcccgccgagcgacacgccc
accgagccgctcgaacagctcgcgctgcccatcgaggtcgagctgccgttccgcatcgac
gaactgcgctgggccggtccgcccgcgctccaggccaaccagctcaagggcagctaccgc
tacaccggcacagagcatcaactggaggtcaagggcgtcgacattgccgacggccactac
agcgcgcgcgtgaagctgcaggggccggcacccatggcgctcggcgccacgctggacggc
cgcgtgaaggcaccgctggccgaagaccgcagcatcgaggtgctggccgaagccgccatc
aagggcaacctcgcgggcaccgacgcgcggctgcaggtggctgccgagctgaagccggcc
gagcccgatgccgaggcgcccatggaagccaagctgcaggcccgcatcgcaccctggctg
ccgcagcccgtcatcgatgccaaggccgatctgcgcaacgtcgacgcggccagcctctgg
cccggcgcgccgcggacccgcctgaccggcacggtcgagctgcagcccgacgcggccacc
ggccccgccgcctggcaggcctcggccagtatccgcaacgcgctgccggggccctgggac
aagggcgcgctgccgctcgaacaggtcgaggcgcgcgtgggtttcgacggcaccaactgg
acgattccggaagccacgctgcgcgcgggcggcgggcgcatcgacgccgaaggccgctgg
agccccgcgcccgcgccgtggcaggcgcgcaccaccgtgcgcggcgtgcggcccggcctg
ttgcacagcgagctttcgggcgcaccgatcaacggcacggccacggcgcagcagcgcgag
gacaccatcggcttcgaactggcgctgcgggccgaaggcggcgccggcagcgcggccatg
cccggcttcggcctcggccgcgtgctcgcccaaggccagtggaaaaaccaggtgctggac
ctgcgaacgctgcgcctcgaagccgagcgcgccagcatcgagggccggctgcaggtgcgc
gtggccgagcaggctgcgagcggcaagctcgacctcgcactgccgggcggcgtcgcgcag
ctcgaaggccgcatcgcaccggcgcagggagccggcgacatcaaggcgcgcatcgacgac
gccgaaaccgtgcagcgctggatcgaagccctgcccgaactgtcgaaggtgttcgcgggc
aagaccgccaagggctccgcgcggctcgacgccagctggcagggcggctggcagaccatc
cagcgccggctcgagaaccccaatgcgccggcccagcgcggcgtcgtcgaacccagcctg
aaggcatcgctcggcgtgccgcgcctcgagctgcgcatgccggctgcaactggcaatgcg
gcggccaccacggtccagctgaaagacctgcgcgcggaccttgccggcagcctggcccag
gccacgctcgcactgcagggcgaagccaccaccggcacccagaagctcacgctcgacgcg
cgcgccagcggcggccttgcgggcaccaaccaatggcgcgcggcgctcgccagcctgcgc
ctgcaggcccaggacagcgcgcggcccgccacggccagcgcgccctggacgctggagctc
ggccgcgaggtcaccgccaccatcaagaccagcggaagcggcaccgccagccgcctcgat
ctcgaagcctcggccgccgccgccacgctgcgcgggccggcaccaggtaccgtgcgcatc
gaatggcagccgctgcgcttcagccgaagcggcgtggcgcccaaccaggcctttcgcgtg
cagtcgcaaggcaagctgcagggccttccgatggcctgggccgaagccttcggcgccagc
gccaccttcaacgagctcggcgtgagcggcgacctcatgttcgacggcgactgggacatc
gacgccggcgacaccttgcgcgcccatgcgcggctcgcgcgccagagcggcgacatccgc
gtgcaggcgggcgaggccgcgctggtcacgcgcatcacgagccgcggcaccggcacggcc
agcgagcgcacgatgaactccgccaccgcgcaaggaacgaccgcgcccagcacgccggca
ggcctgcgccaggccgaactgcggctggacgcgcaaggcgaggccgtgcgcgccacgctg
gcctgggacagcgaacgtgcgggcaagatcaacgccgagctcaacacgcgcatgcagcag
cgcgcaggcggctggcaatgggcgcccgatgcgcagctggccggcaacgtcaaggccacg
ctgccgaacctcggcgtgtggtcgatgctcgcgccgcccggctggcgcgtggcgggcacg
ctggacgccgatgccgccctctcgggcaaccgcgcagcgccgcgctggaacggcacgctg
ggcgccgacaagctcgcactgcgcgcgccggtcgaaggactcgacctgcgcgacggccgc
ctgcgcgccacgctcacgggcgaacgcatcgagatcaccgaattcacgctcaagggcggc
accggcagcacggtgcgcatcgcgggccagagcggcaaccgcagcaccgcggccagcgaa
gccgcgagcgatggcggctcgctctcggcacgcggcgacatggcctggggcgcggccggc
gcatcgggcacgggcatccgcatggcgctgcaggccgacttgcgcgcgttgcgcgtgctg
gttcgcaccgaccggcaggtcacgctctcgggcaacctgcaggcgcggctcgacggcggc
cagttcaacgtgcgcggcaagctcaggaccgaccgcgcggtgatcatcctgcccgacgag
accgcgccgagcctcggcaccgacgtggtggtgcgctccgccgccaaggaccgcgagatg
gccgagcaggcgcggcgcgatgccgcgcgcaatgaggcgcaggccgccaagccgcagacc
gcgaagccgcccgacatcgcggtgaacttcgacctgggcgacgacttcgcggtgcagggg
cgcggcatcaccacgcggctcgaaggcgacctggagatccgcagcacccgcctcgatgcg
ccgccgcgcatcaccggcgaagtgaagaccgtgcggggccagtaccgcgcctatggccag
cagctcgacgtggaaaccggcgtggcccgcttcaacgggcccttcgacaatcccgcgctc
gacatcctggccatccggcccaacatctcgcagcgcgccggcgtgcagatcacgggcagc
gcgcagtcgccgcgcgtcaagctctattccgagcccgcgctgcccgacgcagaggcgctg
tcatgggtggtgctcggccgcgcctcggccaccagcggcggcgaatcggcgctgctgcag
caggcggcgctcgcattgatcggccacgtcagcaagggcacgagcggcggcagcctggcc
agccgcttcggcctcgacgaactcggcttcaagggccccggcaacggcggcgacctgcgc
gagtcggccgtcacgctcggcaagcggctgtcgaaggatttctatctcacctacgaacgc
agcctgggcggcaccttcggcaccatcttcatcttctacgacctgacgcagcgcctcacg
ctgcgcggacaggccggccagaccagcgggctcgacctgatctacacgctgaagtacgac
tga
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