KEGG   Variovorax paradoxus B4: VAPA_1c47090
Entry
VAPA_1c47090      CDS       T02835                                 
Name
(GenBank) putative type I secretion outer membrane protein, TolC family
  KO
K12543  outer membrane protein, adhesin transport system
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpd02000]
    VAPA_1c47090
   02044 Secretion system [BR:vpd02044]
    VAPA_1c47090
Transporters [BR:vpd02000]
 Other transporters
  Pores ion channels [TC:1]
   VAPA_1c47090
Secretion system [BR:vpd02044]
 Type I secretion system
  Adhesin protein transporter
   VAPA_1c47090
SSDB
Motif
Pfam: OEP Germane
Other DBs
NCBI-ProteinID: AGU51776
UniProt: T1XGX9
LinkDB
Position
1:complement(4953722..4955056)
AA seq 444 aa
MSASRLLPSAAAGLFLLLAGTGAFAQASAATPLGMTEAVRLAATSHPTVRNAVGQALQAG
EGIADARSGYYPQVSAGLSARTGNRQLQTDGRRQVHQASLSVTQMLYDFGKVSSAVNEAE
ASATAARAKLLLAVDDVVRDTAQAWIEVHRQQALGEIAQAQVKGVQSLAGLVGERQAKGA
TSQSDVAQAQSRLEAARAQQLNTASQAERWRLNLMHLTQGRMPVDIAGEASAPLASACAA
HPQTALPAPTVQMAQAERDMAQAALRGADAQLLPTLSLNAGVNRGLESGARLAGQSATES
TLTVNFSAPLYEGGRSQARQRAAAHAVEAAEAALGYAQLSVRQRLEDARVQSQGHAQRLP
VLAARVHSTQRTRDLYREQYLQLGTRSLLDLLNAEQEFHGARFEQAESAHEVQRLAVECL
YQSGRLREAFGLVDAGDLVAGGRP
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtctgcttcccgtcttcttccgtccgccgccgcgggccttttcttgctgctcgccgga
acgggggcgtttgcgcaagcgagcgccgccaccccgctgggcatgaccgaggcggtgcgc
ctggccgccacatcgcacccgaccgtgcgcaacgccgtcgggcaagcgctgcaggcgggc
gagggcattgcggacgcgcgctcgggctactacccgcaggtcagcgcgggcctcagcgca
cgcacgggcaaccgccagctgcagaccgacgggcgccgccaggtgcaccaggcctcgctg
tcggtgacccagatgctgtacgacttcggcaaggtgtcgagcgccgtgaacgaggccgaa
gcctcggccacggccgcgcgcgccaagctgctgttggcggtcgacgacgtggtgcgcgac
accgcccaggcgtggatcgaagtgcatcgccagcaggcgctcggcgaaatcgcgcaggcc
caggtgaagggcgtgcagtcgctggccggcctggtgggcgagcgccaggccaagggcgcg
accagccagtcggacgtggcgcaggcgcagtcgcgcctggaggccgcgcgtgcccagcaa
ctcaacaccgcgtcccaggccgagcgctggcgcctcaacctcatgcatctgacccagggc
cgcatgccggtcgacattgccggcgaagcgtcggcgccgctcgcgagcgcctgcgccgcg
cacccgcagacggccttgcccgcaccgaccgtgcagatggcacaggccgagcgcgacatg
gcacaggccgcgctgcgcggtgccgatgcgcaactgctgcccacgctgtcgctgaacgcc
ggcgtcaaccgggggctcgaatccggcgcgcggcttgccggccagtccgccaccgaaagc
acgctcaccgtgaacttcagtgcgccgctgtacgaaggcgggcgcagccaggcccgccag
cgcgccgccgcgcacgccgtcgaggcggccgaggccgcgctgggctatgcacagctgagc
gtgcggcagcggctcgaagacgcgcgcgtgcaatcgcaaggccacgcgcagcgcctgccc
gtgctcgccgcgcgcgtgcacagcacgcagcgcacgcgcgacctgtaccgcgagcagtac
ttgcagctgggcacgcgctcgctgctcgacctgctcaatgccgagcaggagttccacggc
gcgcgcttcgaacaggccgagagcgcgcacgaagtgcagcggctcgcagtcgagtgcctg
taccagtcgggccgcctgcgcgaagccttcgggctggtcgatgcgggcgacctcgtggcc
ggaggccggccatga

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