Variovorax paradoxus B4: VAPA_1c47590
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Entry
VAPA_1c47590 CDS
T02835
Symbol
phrA
Name
(GenBank) deoxyribodipyrimidine photo-lyase PhrA
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpd03400
]
VAPA_1c47590 (phrA)
Enzymes [BR:
vpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VAPA_1c47590 (phrA)
DNA repair and recombination proteins [BR:
vpd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VAPA_1c47590 (phrA)
Prokaryotic type
VAPA_1c47590 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGU51825
UniProt:
T1XI54
LinkDB
All DBs
Position
1:5013692..5015239
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AA seq
515 aa
AA seq
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MPPILLAVDKTYPKGLMWFRRDLRVDDNAALYHALRACRQVVCVFVFDRAILDPLPRVDR
RVEFIRESLAELDEELRALSGGLIVRHADAIEEIPALAHGLDVQAVFANRDDEPDALARD
AQVLGALANAGVSFHTYKDSTVFDRDEVLTKTGQPYTVFTPYKRAWLAKVDSFFLKPYPV
RSHADALAPPPEAHRTPVPSLEEIGFRRSNLSELDIPTGSQGAAALFEDFFQRIDRYDAA
RNFPAVRGPSYLGVHLRFGTVSIRQLAGVAHQLSLQGDAGATSWLGELIWREFYFQILVH
FPHVHSGGESKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDAAMLQINQSGYMHN
RLRMVVASFLCKDLGLDWRRGERYFALHLNDFELASNNGGWQWASSSGCDAQPYFRIFNP
VTQSERFDPEGKFIRRYLPQLAGLSNAAIHAPWTASPVELEAAGIKLGETYPKPVVDHAE
AREQTLRRYAAVHGADQPPLSGASARSPRRRRSAP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgattttactggccgtcgacaagacctatcccaaagggctcatgtggtttcgc
cgcgacctgcgcgtggacgacaacgcggccctgtaccacgcccttcgggcctgccggcag
gtggtgtgcgttttcgtgttcgaccgggccatcctggacccgctgccccgggtcgaccgg
cgggtggagttcatccgggaatcgctggcggagctcgacgaagagctgcgggcgctgagc
ggcgggctgatcgtgcggcacgccgacgccatcgaggagatcccggcgctggcccacggc
ctggacgtgcaggccgttttcgccaaccgcgacgacgagcccgacgcgctggcgcgcgac
gcccaggtgctcggtgcgctggccaatgcgggcgtgagcttccacacctacaaggactcc
accgtcttcgaccgcgacgaggtgctcacgaaaacaggccagccgtacacggtgttcacg
ccctacaagcgggcctggctggccaaggtggattccttcttcctcaagccctacccggtt
cgcagccatgccgacgcgctggcgccgccgcccgaggcccatcgcacgccggtgccttcg
ctcgaggagatcggctttcgcaggagcaatctctccgagctcgacattcccaccggcagc
cagggtgccgccgcgctgttcgaggactttttccagcgcatcgaccgctatgacgccgcg
cgcaattttccggcggtgcggggcccgagctacctgggcgtgcacctgcgcttcggcacg
gtgtcgatccggcagctggcgggcgtcgcgcaccagctctcgctgcagggcgacgcgggt
gcgacaagctggctcggcgaactgatctggcgcgagttctatttccagatcctggtgcac
ttcccgcacgtgcattcgggcggcgaatcgaagagcttccgccccgagtacgacaagatc
cagtggcaccacggcaagcacgccgaccagctgttcgaggcctggtgccagggccgcacg
ggctacccgctggtggacgcggccatgctgcagatcaaccagagcggctacatgcacaat
cgcctgcgcatggtggtggccagctttctctgcaaggacctggggctggactggcggcgc
ggcgagcgctactttgcgctgcacctgaacgatttcgagctggcttcgaacaacggcggc
tggcaatgggccagctccagcggctgcgacgcccagccctacttccgcatcttcaatccg
gtgacgcagagcgagcgcttcgaccccgaaggcaagttcatccggcgctacctgccgcag
ctcgcggggctgtcgaacgccgcgatccacgccccctggacggcatcgccggtggaactg
gaagccgccggcatcaagctcggcgaaacctaccccaagccggtggtcgaccacgccgag
gcgcgcgagcagacgctgcggcgctatgccgcggtgcacggcgccgaccagccgccgctc
agcggcgcgtcagcacgatctccgcgccggcgtcggagcgccccctga
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