Variovorax paradoxus B4: VAPA_1c47800
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Entry
VAPA_1c47800 CDS
T02835
Name
(GenBank) putative ribose ABC transporter, ribose-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c47800
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VAPA_1c47800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c47800
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VAPA_1c47800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AGU51846
UniProt:
T1XH51
LinkDB
All DBs
Position
1:5038964..5039920
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AA seq
318 aa
AA seq
DB search
MKFTRRTLQSTAALALLGALAASPALAQDKPKVALVMKSLANEFFRTMEDGAKAHQKAHA
AQYTLMANGIKDETDTAAQIKMVEQMMAQKINALVIAPADSKALVPVVKAAIDRGILVVN
IDNQFDAAALKEKGIQVPFVGPDNRAGAKLVGDELAKSLKAGDKVGIIEGVSTTFNAQQR
TLGYQDAMKAAGATVVGVQSGQWEIDKGNTVAAGMMREHPDLKALLAGNDSMALGAVAAV
KAAGKTGKVLVVGYDNIGAIKPMLADGRVLATADQFAAKQAVFGIETALKALAEKKPQSA
MPAEVKTDVVLVTKSSAK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcacccgccgtacgctgcaaagcacagccgccctggcgctgctgggcgccctc
gccgcctcgcccgcgctcgcccaggacaagcccaaggtcgcgctggtcatgaagtcgctg
gccaacgaattcttccgcaccatggaggacggcgccaaggcgcaccagaaggcgcatgcc
gcacagtacacgctgatggccaacggcatcaaggacgagaccgacacggccgcccagatc
aagatggtcgagcagatgatggcgcagaagatcaacgcgctggtcatcgcgccggccgat
tcgaaggcgctggtgccagtggtcaaggcggccatcgaccgcggcatcctcgtcgtcaac
atcgacaaccagttcgacgccgccgcgctgaaggaaaagggcatccaggtgcccttcgtc
ggccccgacaaccgcgccggcgccaagctggtcggcgacgagttggccaagagcctgaag
gccggcgacaaggtcggcatcatcgaaggcgtgtcgaccaccttcaatgcgcagcagcgc
accctcggctaccaggacgccatgaaggccgccggcgccacggtggtgggcgtgcagtcg
ggccagtgggaaatcgacaagggcaacacggtggccgccggcatgatgcgcgagcacccc
gacctgaaggcgctgctcgcaggcaacgacagcatggcgctcggcgcggtcgctgccgtc
aaggccgcgggcaagaccggcaaggtgctggtggtgggctacgacaacatcggcgccatc
aagccgatgctggccgacggccgcgtgctcgccaccgccgaccagttcgcggccaagcag
gcggtgttcggcatcgagaccgcgctcaaggcgctggccgagaagaagccgcagtcggcc
atgccggccgaagtgaagaccgacgtggtgctggtcaccaaatcgtcggcgaagtaa
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