Variovorax paradoxus B4: VAPA_1c48230
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Entry
VAPA_1c48230 CDS
T02835
Name
(GenBank) putative outer membrane protein, OmpA family
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c48230
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c48230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DNM3A_N
Motif
Other DBs
NCBI-ProteinID:
AGU51888
UniProt:
T1XH43
LinkDB
All DBs
Position
1:5081300..5081917
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AA seq
205 aa
AA seq
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MRKMTTDRASLFVAVLVTALLAACSTPGTRVVLLPQADDKPSAVIVRAKDGEEVLSRPYQ
RATAAVGASGAPVVDQADPAKVQADHKILFDMRPPAPQRYTVYFEVGGTTLTPASQQVMN
EALIAAQTRSGSDIVVTGHTDTKGALEQNDTLSQRRAQEVMQLFVERQFPSARIEAVGRG
ERELAVPTADEVDEPRNRRVTIEVR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatgacgacggaccgggcctcccttttcgttgccgtgctggtcactgcgctg
cttgccgcatgttcgacgccgggcacccgcgtggtgctgctgccccaggcggacgacaag
ccctctgccgtgatcgtgcgcgcgaaggacggcgaagaagttctttcccggccctaccag
cgtgcaacggccgcggtcggcgcttccggcgcgccggtggtcgaccaggccgaccccgcc
aaggtgcaggcggaccacaagatcctgttcgacatgcggccgcctgcgccgcagcgctac
acggtgtatttcgaggttggcggcaccacgctcacgcctgcgtcgcaacaggtcatgaac
gaagcgctgattgccgcgcaaacgcgcagcggcagcgacatcgtggtgaccgggcacacc
gacaccaagggcgccctcgagcagaacgacacgctctcgcagcggcgggcgcaggaagtg
atgcagctcttcgtggaacggcagtttccttccgcgcggatcgaggctgtgggccgcggc
gagcgcgaactcgccgttcccacggccgacgaggtggacgaaccgcgcaaccggcgcgtc
accatcgaagtccggtga
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