Variovorax paradoxus B4: VAPA_1c48340
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Entry
VAPA_1c48340 CDS
T02835
Name
(GenBank) FtsJ-like methyltransferase family protein
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpd03009
]
VAPA_1c48340
Enzymes [BR:
vpd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
VAPA_1c48340
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
VAPA_1c48340
Ribosome biogenesis [BR:
vpd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VAPA_1c48340
23S rRNA modification factors
VAPA_1c48340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltrans_SAM
Methyltransf_23
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AGU51899
UniProt:
T1XHR8
LinkDB
All DBs
Position
1:complement(5091471..5092262)
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AA seq
263 aa
AA seq
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MRADQLLVERGLAASRSQAVRLIAGGMRWRDAGSADAWRSVVKNRDEVPESAEVELDDAA
EARYVSRGGLKLEGALAASGVSADGKLCLDVGQSTGGFTDCLLQGGAAKVVGVDVGHGQL
HARLREDARVVAIEGVNARALSPDDLQEEEGEEPSELRFDLIVGDLSFISLTLVLPAVVP
FLADDGQLLMLVKPQFELQPGQVGKGGIVRDASMYAVVEKRLRDACEALGLRVLRWFDSP
IAGGDGNREFFIHAVRAVRADGS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgatcaattgctggtcgaacgcggcctcgccgcttcgcgctcgcaggccgtg
cggctgatcgccggcggcatgcgctggcgcgatgcgggcagcgcggacgcgtggcgttcg
gtggtgaagaaccgcgacgaggtgcccgagtccgccgaggtcgagctcgacgatgcggcc
gaggcgcgctacgtctcgcgcggcgggctcaagctcgaaggcgcactggcggcgagtggc
gtcagtgccgacggcaagctgtgcctcgacgtgggccagtcgaccggcggcttcaccgac
tgcctgctgcaaggcggcgcggcaaaggtggtgggcgtcgatgtcggccacgggcagctg
catgcgcggctgcgcgaggacgcgcgtgtggtggccatcgaaggcgtcaatgcgcgtgcg
ttgtcgccggacgacctgcaggaagaagaaggcgaagagccttccgaactgcgcttcgac
ctgatcgtcggcgacctgtcgttcatctcgctcacgctggtgctgccggccgtggtgccg
ttcctggccgacgacggccagctgctgatgctcgtcaagccgcagttcgagctgcagccg
ggacaggtcggcaagggcggcatcgtgcgcgacgcgtcgatgtatgcggtggtcgaaaag
cgcctgcgcgatgcctgcgaggcgctcgggctgcgcgtgctgcggtggttcgacagcccc
attgccggcggcgacggcaaccgcgagtttttcattcacgccgtgcgcgctgttcgcgcg
gacggctcctga
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