Variovorax paradoxus B4: VAPA_1c48520
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Entry
VAPA_1c48520 CDS
T02835
Symbol
potH
Name
(GenBank) putative spermidine/putrescine ABC transporter, permease protein PotH
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c48520 (potH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c48520 (potH)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
VAPA_1c48520 (potH)
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GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AGU51917
UniProt:
T1XG66
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All DBs
Position
1:5112046..5113290
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AA seq
414 aa
AA seq
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MSVPQLPAEARPGELRRALARAESRRKWRAFALTAPLLVFLLLTLLVPIVALLQRAVENP
EVANALPRTVRALDGWNRKEAPAAAAYAAIAADLGQLPDSSDAGALARRLNTEIAGARSL
VMGTFRALPIAGTPEEVKARMLELDPRWGEAPYWQAIAKNGSRWTPDYLLASVDLRRDVA
GEVERMPADQRAFAGILLRTFNISAVVTFFCLLLAYPLAWWLSTLPARKANVLMILVLVP
FWTSILVRVAAWIVLLQSEGLVNRGLMGIGLIDHPLALLFNRTGVIIAMVHILLPFMILP
LYSVMKSVPPTYLRAAVSLGSSPLAAFFRVYVPQTYPGIGAGALLVFILAIGYYVTPALL
GGADDQMLSYYIARYTNVEINWGMACALGAVLLVATLVLYAVYRRIGKAELSLG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttccccagctcccggcagaggcgcgacccggcgaactccggcgtgcgctggcg
cgcgccgagtcgcgccgcaagtggcgcgcctttgcgctcacggcgccgctgctggtgttt
cttctgctgacactgctggtgccgatcgtcgcgctgctgcagcgcgcggtcgagaaccct
gaggtggccaacgcgctgccgcgcaccgtgcgcgcgctcgacggatggaaccgcaaggag
gcgcccgcggccgcggcctatgccgccatcgcggccgacctcggccagctgcccgacagc
tccgacgcgggcgccctggcgcgccgcctcaacaccgagatcgcgggcgcccgctcgctg
gtgatgggcaccttccgggcgctgccgatcgccggcacgccggaagaggtcaaggcgcgc
atgctggagctcgatccgcgctggggcgaggcgccgtactggcaggcgattgccaagaac
ggttcgcgctggacgcccgactacctgctcgcctcggtcgacctgcggcgcgacgtggcc
ggcgaggtcgagcgcatgcccgccgaccagcgcgcctttgccggcatcctgctgcgcact
ttcaacatcagcgccgtggtcaccttcttctgcctgctgctggcctatccgctggcctgg
tggctgtcgacgctgccggcgcgcaaggccaacgtgctgatgatcctggtgctggtgccg
ttctggacttccatcctggtgcgcgtggcggcctggatcgtgctgctgcagtccgagggg
ctggtcaaccgcggcctgatgggcatcggcctgatcgaccatccgctggcgctgctgttc
aaccgcaccggcgtgatcatcgcgatggtgcacatcctgctgcccttcatgatcctgccg
ctctacagcgtgatgaagagcgtgccgcccacctacctgcgcgccgccgtctcgctgggc
agctcgccgctggcggctttcttccgcgtgtacgtgccgcagacctacccgggcatcggt
gccggcgcgctgctggtcttcatcctggcgatcggctactacgtgacaccggcgctgctc
ggcggcgcggacgaccagatgctgagctactacatcgcgcgctacaccaacgtcgaaatc
aactggggcatggcctgcgcgctgggcgccgtgctgctggtcgccacgctggtgctgtac
gccgtgtaccgccgcatcggcaaggccgagctgagcctcggctga
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