Variovorax paradoxus B4: VAPA_1c48640
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Entry
VAPA_1c48640 CDS
T02835
Symbol
mvaB
Name
(GenBank) hydroxymethylglutaryl-CoA lyase MvaB
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00280
Valine, leucine and isoleucine degradation
vpd00650
Butanoate metabolism
vpd00907
Pinene, camphor and geraniol degradation
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd04146
Peroxisome
Module
vpd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VAPA_1c48640 (mvaB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VAPA_1c48640 (mvaB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VAPA_1c48640 (mvaB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VAPA_1c48640 (mvaB)
Enzymes [BR:
vpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
VAPA_1c48640 (mvaB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AGU51929
UniProt:
T1XHU9
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Position
1:complement(5128530..5129450)
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AA seq
306 aa
AA seq
DB search
MKLPTKVKIVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIEVTSFVSPKWVPQMA
DNAEVMHGIQRKPGVRYSVLTPNMKGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINCS
IAESIERFAPVVAAALDKGIDVRGAMSCTVGCPYEGEIAPERVGMLAKLMKDIGVQRVDV
ADTIGVGTPRKVKAAIEAALAHFGVDHISGHFHDTYGQALVNTLASLELGVWNFQSSSAG
LGGCPYAKGATGNVATEDVVYMLHGMGIETGIDLDKLIDAGVYISEALGREPNSRASKAI
RTKRAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccccaccaaagtcaagatcgtcgacgtcggtccgcgcgacggactgcagaac
gagaagcagccggtctccgccgaagtcaagatcggcctcgtgcaccgcctgcaggacgcg
ggcctgaaggagatcgaggtcaccagcttcgtgagccccaagtgggtgccgcagatggcc
gacaacgccgaggtgatgcacggcatccaacgcaagcccggcgtgcgctactcggtgctc
acgcccaacatgaagggcttcgaggccgccattgccgcgccacgcgaggagtggcccgac
gagatcgtggtgttcggcgccgcgagcgaagccttcagccagaagaacatcaactgctcg
atcgccgagagcatcgagcgcttcgcacccgtggtggccgcggcgctcgacaaaggcatc
gatgtgcgcggcgccatgtcgtgcaccgtcggctgcccctacgaaggcgagatcgcaccc
gaacgtgtgggcatgctggcgaagctgatgaaggacatcggcgtgcagcgcgtggacgtg
gccgacaccatcggcgtgggcacgccgcgcaaggtgaaggccgccatcgaggccgcgctg
gcgcatttcggcgtggaccacatctcgggccacttccacgacacctacggccaggcgctg
gtcaacacgctggcctcgctggagctgggggtctggaacttccagtcgtcctccgccggg
ctgggcggctgtccctacgccaagggcgcgaccggcaacgtggcgaccgaggacgtggtc
tacatgctgcacggcatgggcatcgagaccggcatcgacctcgacaagctgatcgacgcg
ggcgtgtacatcagcgaggcgctggggcgcgagccgaattcgcgggcgtcgaaggcgatc
cgcacgaagcgggctggttga
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