KEGG   Variovorax paradoxus B4: VAPA_1c49250
Entry
VAPA_1c49250      CDS       T02835                                 
Name
(GenBank) acyl-CoA ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00061  Fatty acid biosynthesis
vpd00071  Fatty acid degradation
vpd01100  Metabolic pathways
vpd01212  Fatty acid metabolism
vpd02024  Quorum sensing
vpd04146  Peroxisome
Module
vpd_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    VAPA_1c49250
   00071 Fatty acid degradation
    VAPA_1c49250
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    VAPA_1c49250
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VAPA_1c49250
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vpd01004]
    VAPA_1c49250
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vpd04147]
    VAPA_1c49250
Enzymes [BR:vpd01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     VAPA_1c49250
Lipid biosynthesis proteins [BR:vpd01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   VAPA_1c49250
Exosome [BR:vpd04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   VAPA_1c49250
  Exosomal proteins of breast cancer cells
   VAPA_1c49250
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2
Other DBs
NCBI-ProteinID: AGU51990
UniProt: T1XIP5
LinkDB
Position
1:5191383..5193077
AA seq 564 aa
MQTSARRQNYPADVPHEIDPEQYRSLPHMFDEAFARYAERPFSVCMERWMSYGELDTLSK
ALGAWLQSLGLAPGARVAIMLPNVPQFAVTMCGVLRAGYTCVNVNPLYTARELEHQLKDS
GATAIVILENFAATLEQVVERTPVKHVIVTSMGDLLGGLYGAWITVAVRHLAKMVPPYKL
PLGNGRTVTPFSKVIEDGRGRGLAPDQSTLDSVAFLQYTGGTTGLSKGAVLTHRNIVAAT
LQAEAWFTPALSRAGDLSKVNSIAALPLYHIFALTLCLLVIRQGSHMTLVPNPRDFDKFI
AVLKKRPFHMLPAVNTLFNALLMHPGFKSIDFSTLFVSQAGGMAASEGTARRWFEATGCP
MIEGWGMSETCAIGTNNPVSNTQFTGTIGLPLPSIEIAIKDDEGNSLPVGAPGELCIRGP
NVMAGYYNQPAETAAAFTADGFMRTGDIAVMQEDGYSRIVDRKKDMILVSGFNVFPNELE
NVISLCPGVVECAAVGVPDEKQGEAIKVFVVRRDAALTEEAVLQYCNGQLTGYKRPKHIE
FRDSLPKTNVGKILRRELRAGASA
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgcagacatccgcgcgacgacagaactacccggccgacgtgccgcacgagatcgatccc
gagcagtaccggtccctgcctcatatgttcgacgaggcattcgcccgctatgccgagcgg
ccgttctcggtctgcatggaacgctggatgtcctatggagagctcgacaccttgtcgaag
gccttgggcgcgtggctccagtcgctgggcctcgcgcctggcgcacgggtcgccatcatg
cttcccaacgtgccccagttcgccgtcacgatgtgcggcgtgctgcgcgcgggctatacc
tgcgtcaacgtcaatccgctctacacggcgcgcgaactcgagcaccagctcaaggactcg
ggcgccacggccatcgtcatcctcgagaacttcgccgcaacgctggaacaggtggtcgag
cgcacgccggtcaagcatgtgatcgtcacttcgatgggcgatctgctgggcggcctctat
ggcgcgtggatcacggtcgcggttcgccacttggcgaagatggttccgccgtacaagctg
cctctgggcaacggtcgtaccgtcacgcctttttccaaggtcatcgaagacgggcgtgga
cgtgggcttgcgccggatcagagcaccctcgattcggtcgcattcctgcagtacaccggc
ggcacgacgggtctgtccaagggcgcggtgctgacccaccgcaacatcgtcgcggccacg
ctgcaggcggaagcctggttcacgccggcgctgtcgcgggcgggcgacctgtcgaaggtc
aacagcatcgcggcgcttccgctctatcacatcttcgcgctgacgctctgcctcctggtc
atccgccagggctcgcacatgacgctggtccccaatccacgcgacttcgacaagttcatc
gcggtgctcaagaagcgtcccttccacatgctgcccgcggtgaacacgctcttcaatgcg
ctcctgatgcatcccggattcaagtcgatcgatttctccacgctgttcgtgtcgcaagcg
ggcggaatggccgcatccgagggcacggcgcggcggtggttcgaggccaccggctgcccg
atgatcgaaggctggggcatgagcgagacctgcgcgatcggcaccaacaacccggtgtcg
aacacccaattcacgggcaccatcggcttgccgctgccgagcatcgagatcgccatcaag
gacgatgaaggcaactccctgcccgtgggcgcaccgggcgagctctgcatcaggggcccc
aacgtcatggccggctactacaaccagcccgccgaaaccgcggcggccttcacggccgat
ggcttcatgcgcaccggcgacattgccgtcatgcaggaggacggctacagccgcatcgtc
gaccgcaagaaggacatgattctggtgagcggcttcaacgtctttccaaacgaactggag
aacgtgatctcgctgtgtcctggcgtcgtcgagtgcgccgccgtcggtgtcccggacgaa
aagcagggcgaagcgatcaaggtctttgtcgttcgcagggacgcggcgctcaccgaagag
gccgtgcttcaatactgcaatggacagctcaccggctacaagcgaccgaagcacatcgaa
ttccgggactcgctgccgaagaccaatgtcgggaagatcctgcggcgcgagctgcgcgcc
ggcgcgagcgcctga

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