Variovorax paradoxus B4: VAPA_1c50250
Help
Entry
VAPA_1c50250 CDS
T02835
Symbol
potB
Name
(GenBank) putative spermidine/putrescine transport system, permease protein PotB
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c50250 (potB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c50250 (potB)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
VAPA_1c50250 (potB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AGU52079
UniProt:
T1XIE4
LinkDB
All DBs
Position
1:5300035..5300928
Genome browser
AA seq
297 aa
AA seq
DB search
MTAEAPPRSSARRKARPGRGAFWLIAPALVLIGVFLVLPYLNIIAMSLRPTAAGAPYGAG
FTLANYAHALGDGYILGVLADTLVLGATTVPICLLLGYPVAYHLARSRSRWGSLLYVLVL
SPLLVGVVVRSFGWLILLSGNGVINRVLIDLGLVETGLQLMNNRLGVTIALVHVFLPFMI
LPLVGVIQSIDPTLEQAARSLGASRLKVFWRLVLPMSWPGIQAGTVLVFVLTLSAYVTPV
MLGGAQVKTMSVLVVQNLIDNFQWPAGAAQALVLSACGMVAVWVYARLTGRFMKGLQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgaagcgccgccgcgcagcagcgcccggcgcaaggcgcgcccgggacgcggc
gcgttctggctgatcgcacccgcgctggtgctgatcggcgtgttcctggtgctgccctac
ctgaacatcatcgccatgagcctgcggcccacggccgcgggggcaccctatggcgcgggc
ttcacgctcgccaactacgcccatgcgctcggcgacggctacatcctcggcgtgctggcc
gacacgcttgtgctcggcgcgacgaccgtgcccatctgcctgctgctgggctaccccgtg
gcctaccacctcgcgcgctcgcgttcgcgctggggcagcctgctgtatgtgctggtgctg
tcgccgctgctggtgggcgtggtggtgcgcagcttcggctggctgatcctgctgtcgggc
aacggcgtgatcaaccgcgtgctgatcgatctcgggctggtcgagaccggcctgcagctc
atgaacaaccgcctgggcgtgaccatcgcgctggtgcatgtgttcctgccgttcatgatc
ctgccgctggtgggcgtgatccagagcatcgacccgacgctggagcaggccgcgcgctcg
ctcggcgcctcccggctcaaggtgttctggcggctcgttcttccgatgtcgtggcccggc
atccaggccggcaccgtcctcgtgttcgtgctcacgctgagcgcctacgtgacgccggtg
atgctgggcggcgcgcaggtcaagacgatgtcggtgctggtggtgcagaacctgatcgac
aacttccaatggcccgccggcgcggcgcaggcgctggtgctctcggcctgcggcatggtg
gcggtgtgggtctatgcccgcctcaccggtcgcttcatgaaaggcctgcaatga
DBGET
integrated database retrieval system
