Variovorax paradoxus B4: VAPA_1c51190
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Entry
VAPA_1c51190 CDS
T02835
Name
(GenBank) putative branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c51190
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c51190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c51190
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c51190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
DLIC
AAA_29
SMC_N
AAA_23
AAA_22
AAA_27
ABC_ATPase
AAA_16
T2SSE
AAA_30
AAA_19
RsgA_GTPase
AAA_15
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AGU52173
UniProt:
T1XI07
LinkDB
All DBs
Position
1:complement(5383071..5383844)
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AA seq
257 aa
AA seq
DB search
MTDVVLQLLNVESAYGPIKAIRGVSLKVRQGEIVTVLGSNGAGKTTILKTISGIIDPRKG
SIEFQGKDITAKDPAHIVQQGLSHVPEGREVFPLLSVRDNLLMGAYTRKDRDGVARDMES
VYAYFPILRERATQDAGLLSGGQQQMLAISRAIMAAPHLILLDEPSLGLSPKLTKEIFEI
VVRINRERGTTILLVEQNANMALNASDHGYVLENGRIVMEDTCERLREKEDIKEFYLGVK
DDGVRGERRWKKKKTWR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcgtcctccagctgctcaacgtcgaaagcgcctacggccccatcaaagcc
ataagaggcgtgagcctgaaagtcaggcagggcgagatcgtgacggtccttggctccaac
ggcgcaggaaaaacaacgatcctgaaaacgatctccggaatcatcgacccccgaaaaggc
agcatcgaattccagggcaaggacatcaccgccaaggatccggcccacatcgtgcagcag
ggcctgagccacgtgcccgaaggccgcgaggtgttcccgctgctgtcggtgagagacaac
ctgctgatgggtgcctacacccgcaaggaccgcgacggcgtggcgcgcgacatggagagc
gtctatgcctacttccccatcctgcgcgagcgcgccacgcaggatgccggcctgctctcg
ggcggccagcagcagatgctcgccatctcgcgcgccatcatggccgcgccgcatctcatc
ctgctcgacgagcccagcctcggcttgagccccaagctgacgaaagagatcttcgagatc
gtcgtgcgcatcaaccgcgaacgcggcaccaccatcctgcttgtggagcagaacgccaac
atggcgctcaacgcctccgaccacggctacgtgctcgagaacggccgcatcgtcatggaa
gacacctgcgaacgcctgcgcgagaaggaagacatcaaggagttctacctgggcgtcaag
gacgacggcgtgcgcggcgagcggcgctggaaaaagaagaagacctggagatga
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