Variovorax paradoxus B4: VAPA_1c51540
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Entry
VAPA_1c51540 CDS
T02835
Symbol
nodI
Name
(GenBank) Nod factor export ATP-binding protein I
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c51540 (nodI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c51540 (nodI)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
VAPA_1c51540 (nodI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_22
AAA_16
AAA_30
AAA_19
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AGU52208
UniProt:
T1XI40
LinkDB
All DBs
Position
1:5420382..5421332
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AA seq
316 aa
AA seq
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MPSSSSSSSSAPLFHASHLCKRYGSTTVVDDLSFEIAPGECLGVIGPNGAGKTTTIRMCL
GLTTPDGGDICALGLQMPRDALAIKAQLGVVTQFDTLDPDFSCAENLVVYGRYFGFSKAQ
VRERVPQLLEFAALSHKADAKPGELSGGMRRRLSLARALVNDPKLLLLDEPTTGLDPQAR
HLMWERLQVLLQQGKSILLTTHFMDEAERLCSRLLVLDHGRKIAEGRPRDLIAEHLEPDV
VEVYGNGALSLAESPELRAMAARVEVSGETVFFYTQDARRLLDALTQRGGLRTFHRPANL
EDLFLKLTGRQIREDG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgccctcctcttcctcttcctcttcctccgcccctctcttccacgccagccacctttgc
aagcgctacggcagcaccacggtcgtggacgacctgtcgttcgagatcgcgcccggcgaa
tgcctgggcgtgatcggcccgaacggtgccggcaagaccaccaccatccgcatgtgcctg
ggcctcaccacgcccgatggtggcgacatctgcgcgctcggcctgcagatgccgcgcgac
gcgctggccatcaaggcgcagctcggcgtggtgacgcagttcgacacgctggaccccgac
ttcagctgcgccgagaacctcgtggtgtacggccgctacttcggcttcagcaaggcgcag
gtgcgcgagcgcgtgccgcagctgctcgagttcgcggcgctctcgcacaaggccgatgca
aagccgggcgagctctcgggcggcatgcggcggcgcctctcgctggcgcgcgcgctggtg
aacgatcccaagctgctgctgctcgacgagcccaccaccgggctcgatccgcaagcgcgc
cacctgatgtgggaacgcctgcaggtgctgctgcagcagggcaagtcgatcctgctgacc
acgcacttcatggacgaggccgagcgcctgtgctcgcgcctcctggtgctcgaccacggc
cgcaagatcgccgagggccgcccgcgcgacctgatcgccgagcacctggagcccgacgtg
gtcgaggtgtacggcaacggcgcgctctctctggccgagtcgccggagctgagggcgatg
gcggcgcgtgtcgaggtgagcggggagacggtgttcttctacacgcaggacgcacggcgg
ctgctcgatgcgctcacgcagcgtggcggcctgcgcaccttccaccggcccgcgaacctc
gaagacctttttctcaagctcacgggtcggcagatccgcgaagacggctag
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integrated database retrieval system
