Variovorax paradoxus B4: VAPA_1c51960
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Entry
VAPA_1c51960 CDS
T02835
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c51960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c51960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c51960
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c51960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_23
SMC_N
AAA_29
AAA_21
AAA_27
KdpD
nSTAND1
RsgA_GTPase
AAA_30
AAA_15
AAA_19
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AGU52250
UniProt:
T1XJF7
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All DBs
Position
1:5463605..5464393
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AA seq
262 aa
AA seq
DB search
MSSNRKVGDVVLDVQNISLSFGGVKALTDISFDVREHEVRAIIGPNGAGKSSMLNCINGV
YWPQQGSITFRGHTFKHMNSRQVAEMGVARTFQNLALFKGMSVLDNIMTGRNLRMKSNLF
QQAIRWGAAEREETKHREFVEQIIDFLEIQAHRKTPVGQLPYGLQKRVDLGRALAMEPQV
LLLDEPMAGMNVEEKQDMSRFILDVNDEFGSTIVLIEHDMGVVMDISDRVVVLDYGKKIG
DGTPDEVRSNENVIRAYLGVEH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaacagaaaagtcggcgacgtcgtcctcgacgtgcagaacatctccttgagc
ttcggcggcgtgaaggcgctcacggacatcagcttcgacgtgcgcgagcacgaggtgcgg
gccatcatcgggcccaacggcgcgggcaagagctcgatgctcaactgcatcaacggcgtc
tactggccgcagcagggctccatcactttccgcggccacaccttcaagcacatgaactcg
cgccaggtggccgagatgggcgtggcgcgcactttccagaacctggcgctcttcaagggc
atgagcgtgctcgacaacatcatgacggggcgcaacctgcgcatgaaatccaacctcttc
cagcaggcgatccgctggggcgcggccgagcgcgaggaaacgaagcaccgcgagttcgtc
gagcagatcatcgatttcctggagatccaggcgcaccgcaagacgccggtcggccagctt
ccttacggcctgcagaagcgcgtcgacctgggccgcgcgctcgccatggagccgcaggtg
ctgctgctcgacgagccgatggccggcatgaacgtggaggagaagcaggacatgagccgc
ttcatcctcgacgtgaacgacgaattcggcagcaccatcgtgctgatcgaacacgacatg
ggcgtggtgatggacatctcggaccgcgtggtggtgctcgactacggcaagaagatcggc
gacggcacgccggacgaagtgcgcagcaacgagaacgtgatccgcgcctacctgggggtc
gaacactga
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