Variovorax paradoxus B4: VAPA_1c51990
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Entry
VAPA_1c51990 CDS
T02835
Name
(GenBank) putative ABC transporter, substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c51990
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c51990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c51990
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c51990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AGU52253
UniProt:
T1XI72
LinkDB
All DBs
Position
1:5466459..5467784
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AA seq
441 aa
AA seq
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MKLKSLALAVAAASALAGAAPAFAQAKEQFIPVLSYRTGAYAPNGTPWANGYVDYLKLVN
ARGGINGVKLSFEECETGYDTARSVECYERLKGKGGGASLVQPLSTGATFAITEKAPIDK
IPVVTVGYGRSESADGTVFKWNFPIAGTYWVAADAIIQAIAKKEGGLDKLKGKKIALIYH
DSPYGKEPIPLLQERAKMHGFDLQLLPVTAPGVEQKATWLQVRQARPDYVLLWGWGVMNS
TALKEAQATGYAREKMYGVWWAGAEPDVKDVGDGAKGYNAVTMQHGAEPQSKLVKDVVSM
LHDKNQGTGPKEEVGQVLYMRGAMSAMLGVEGIRAAQERFGKGKVMTGEQVRWGLENLNL
TQAKLDGLGFAGVMRPISTSCTDHMGAAWARIHTWDGKAWKFTSDWLQADEQIIKPLVKS
TAAKYAAEKKLTARTPADCQS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaatcactcgcactcgccgtggccgccgcatccgcgctggcaggcgcggcc
cctgcgttcgcgcaggccaaggagcagttcatccccgtgctgtcgtaccgcaccggcgcc
tatgcgccgaacggaacgccctgggccaacggctacgtcgactacctcaagctggtgaac
gcgcgcggcggcatcaacggcgtgaagctctccttcgaggaatgcgaaacgggctacgac
accgcgcgcagcgtggaatgctatgagcgcctgaagggcaagggcggcggcgcctcgctg
gtgcagccgctgtccaccggcgcgaccttcgcgatcaccgagaaggcgcccatcgacaag
atccccgtggtgaccgtgggctacggtcgcagcgagagcgccgacggcacggtgttcaag
tggaacttcccgatcgccggcacctactgggtggcggccgacgcgatcatccaggccatc
gccaagaaggaaggcggcctcgacaagctcaagggcaagaagatcgcgctgatctatcac
gacagcccctacggcaaggagccgatcccgctgctgcaggagcgcgcgaagatgcatggc
ttcgacctgcagctgctgccggtcacggcgccgggcgtcgagcagaaggccacctggctg
caggtgcgccaggcgcggcccgactacgtgctgctgtggggctggggcgtgatgaactcg
accgcgctcaaggaagcacaggccaccggctatgcgcgcgagaagatgtacggcgtgtgg
tgggccggcgccgaacccgacgtgaaggacgtgggcgacggcgccaagggctacaacgcc
gtgaccatgcagcacggcgccgagccgcagtccaagctcgtgaaggacgtggtctcgatg
ctgcacgacaagaaccagggcaccggcccgaaggaagaagtgggacaggtgctctacatg
cgcggcgccatgagcgcgatgctcggcgtggaaggcatccgcgccgcgcaggagcgcttc
ggcaagggcaaggtcatgacgggcgagcaggtgcgctgggggctcgagaacctcaacctc
acacaggccaagctcgacggcctgggcttcgccggcgtgatgcgcccgatcagcacctcg
tgcaccgaccacatgggcgcggcctgggcgcgcatccacacctgggacggcaaggcgtgg
aagttcacgtccgactggctgcaggccgacgagcagatcatcaagccgctcgtgaagtcg
accgcggccaagtacgcggccgagaagaagctcacggcacgcacgcccgccgactgccag
agctaa
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