Variovorax paradoxus B4: VAPA_1c52000
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Entry
VAPA_1c52000 CDS
T02835
Name
(GenBank) putative ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c52000
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c52000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c52000
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c52000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_23
AAA_29
AAA_16
AAA_30
SMC_N
AAA_27
AAA_22
AAA_19
MukB
AAA_28
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGU52254
UniProt:
T1XIV4
LinkDB
All DBs
Position
1:5467820..5468632
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AA seq
270 aa
AA seq
DB search
MSSPSIVLNVNGIEVIYNHVILVLKGVSLVVPEGGIVALLGGNGAGKTTTLRAVSNLLAG
ERGAVTKGSIELRGERIEALSPSELVKRGLIQVMEGRHCFAHLTIEDNLMTGAYTRKDGK
AAIAETLEKVYAYFPRLKTRRTSQAAYTSGGEQQMCAIGRALMANPTMVLLDEPSMGLAP
QIVEEVFEIVKDLNTKERVTFLLAEQNTNMALRYADYGYILENGRIVMDGEARSLRENED
VKEFYLGVGGADRKSFRDVKSYKRRKRWLA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacccagcatcgtcctcaacgtcaacggcatcgaggtcatctacaaccacgtg
atcctggtgctcaagggcgtctcgctcgtggtgcccgagggcggcatcgtggcgctgctg
ggcggcaacggtgccggcaagacgaccaccctgcgcgcggtgtccaacctgctggccggc
gagcgaggcgcggtgaccaagggcagcatcgagctgcgcggcgagcgcatcgaggcgctg
tcgccctccgagctggtcaagcgcggcctgatccaggtgatggaaggccggcactgcttc
gcccacctgaccatcgaggacaacctgatgaccggcgcctacacgcgcaaggacggcaag
gcggcgatcgcggagacgctggagaaggtgtatgcgtacttcccgcggctgaagacgcgg
cgcacttcgcaggccgcctacacatcgggcggcgagcagcagatgtgcgcgatcggccgc
gcgctgatggccaacccgaccatggtgctgctcgacgagccctcgatgggcctcgcgccg
cagatcgtcgaggaggtgttcgagatcgtgaaggacctcaacaccaaggaacgcgtgacc
ttcctgttggccgagcagaacaccaacatggcgctgcgctacgccgactatggctacatc
ctggagaacggccgcatcgtgatggacggcgaggccaggagcctgcgcgagaacgaggac
gtgaaggagttctaccttggcgtcggcggtgcggaccgcaagagcttccgcgatgtcaag
agctacaagcgccggaaaaggtggttggcatga
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