Variovorax paradoxus B4: VAPA_1c52120
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Entry
VAPA_1c52120 CDS
T02835
Name
(GenBank) putative xylose repressor XylR
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_24
MarR
MarR_2
HTH_IclR
HTH_31
HTH_Crp_2
SelB-wing_2
HTH_3
HTH_23
Bbp16
Motif
Other DBs
NCBI-ProteinID:
AGU52265
UniProt:
T1XJH1
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Position
1:complement(5485151..5486314)
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AA seq
387 aa
AA seq
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MTIGDQQLLKRMNRSVLLRLLRARPGLSRARLASESGLTKSTVSLLVRELLDEGWLSEAG
TTVADGLGRPSTPLQINVGVRALMGVEIAVETVRLACVSLQGDVLHADTQALADSAPAGA
CAQVARMAAAAHGQLNALGLRLSSIGVCVPGAVDDCTGVVRFAPNLGWRNVSLLPALEEA
FAAAGLPGVTVQLQNDADAAALGEYEFSGGESADPLIFVSCDVGVGAGVVLNDRLFTGAQ
GMAGEIGHTILQIDGPLCSCGRRGCAEAFFGSRALEREAPGAAHAAAFFGVLLQNLWVTF
DPRAIVLGGKSCTGHRGLAQAAFEMVERHADAAGMPAPDLRIARYGELAPAVGAAALALH
EYLRPLQPDARARRARAARDEYRIPSV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcggcgaccagcagctgttgaagcgcatgaaccgcagcgtgctgctgcggctc
ttgcgggcccggcccggactctcccgcgcgcggcttgcaagcgagagcgggctcacgaaa
tcgaccgtgagcctgctggtgcgcgaactgctcgacgaaggctggctcagcgaagcgggc
accaccgtcgccgatgggctgggacggccttcgacgccgctgcagatcaacgtcggggtg
cgcgcattgatgggcgtcgagatcgccgtcgagacggtgcgcctggcctgcgtctcgctg
cagggcgacgtgctgcatgccgatacgcaggcgctggccgacagcgcaccggccggcgcg
tgcgcgcaggtcgcgcgcatggccgcggcagcgcacgggcagctgaacgcactggggctg
cgcctgtcgagcatcggcgtctgcgtgcccggcgcggtggacgactgcaccggcgtggtc
cgcttcgcgcccaacctcggctggcgcaacgtgagcctgctgcccgcgctggaagaagcc
tttgccgcggcggggctgccgggcgtcacggtgcagctgcagaacgacgccgatgccgcc
gcgctcggcgagtacgagttctccggcggcgagagcgcggacccgctgatcttcgtgagc
tgcgacgtgggcgtgggggccggcgtggtgctgaacgaccgcctcttcacgggcgcgcaa
ggcatggcgggcgagatcggccacaccatcctgcagatcgacgggccgctgtgctcgtgc
gggcgccgaggctgcgccgaggccttcttcggctcgcgcgcgctggaacgcgaagcgccc
ggtgcggcgcatgcggctgcgttcttcggcgtgctgctgcagaacctgtgggtcaccttc
gatccgcgcgccatcgtgctcggcggcaagtcctgcaccggccatcgcggcctggcgcaa
gcggccttcgagatggtcgagcgccatgccgacgccgccggcatgcccgcgcccgatctg
cgcattgcacgctatggcgagcttgcacccgccgtgggcgccgccgcgctcgcgctgcac
gagtacctccggccgctgcagcccgatgcgcgcgcgcgccgggctcgcgccgcgcgcgac
gaataccgaataccttctgtttaa
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