Variovorax paradoxus B4: VAPA_1c52820
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Entry
VAPA_1c52820 CDS
T02835
Name
(GenBank) Sua5/YciO/YrdC/YwlC family protein
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpd03009
]
VAPA_1c52820
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c52820
Enzymes [BR:
vpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
VAPA_1c52820
Ribosome biogenesis [BR:
vpd03009
]
Prokaryotic type
Other maturation factors
VAPA_1c52820
Transfer RNA biogenesis [BR:
vpd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VAPA_1c52820
Prokaryotic type
VAPA_1c52820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Sua5_C
Motif
Other DBs
NCBI-ProteinID:
AGU52334
UniProt:
T1XJ24
LinkDB
All DBs
Position
1:complement(5549269..5550228)
Genome browser
AA seq
319 aa
AA seq
DB search
MRVLRAGGLVAFPTETVYGLGADATSDMAVGGIFKAKGRPADHPLIVHVAAGIKGTEALS
RFAQPLPPFAQKLVQAFWPGPLTLIVTRQPGVAAAAAGGQDTIGLRCPSHPVAQALLEAC
AEQGVPGLAGPSANRFGRVSPTTAQHVHDEFGDALPVIDGGACEVGIESTIVDCSRGAPV
LLRPGLITRAQIEAAAGERLSDREVLETPDPRASGTLEAHYAPNAKLRLMDAKAIQAGLD
VLGPGAAHIAVWTRAEVRSHSQRVLQRRMPDDAVASAHQLFAVLREFDAQGVKLIWVETP
PDTPEWEGVRDRLHRASMG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgctgcgcgcgggcgggctggtcgcgttcccgaccgagaccgtctatggactg
ggcgccgatgccaccagcgacatggcggtaggcggcatcttcaaggccaagggccggccg
gccgaccatccgctgatcgtccacgtcgcggccggcatcaagggcaccgaggcgctgtcg
cgcttcgcgcagccgttgccgccctttgcgcagaagctggtgcaggccttctggcccggt
ccgctgacgctgatcgtcacgcgccagcccggcgtggcggccgcggccgccggcgggcag
gacaccatcggtctgcgctgcccctcgcatccggtcgcgcaggccctgctcgaggcctgc
gccgagcagggcgtgccggggctcgcgggcccgagcgccaaccgtttcggccgcgtcagt
cccaccaccgcgcagcacgtgcacgacgagttcggcgatgcgctgccggtgatcgacggc
ggcgcctgcgaggtgggcatcgagtcgaccatcgtcgactgcagccgcggcgcgcccgtg
ctgctgcgtccgggcctgatcacgcgcgcgcagatcgaggccgccgcgggcgagcgcctg
agcgaccgcgaggtgctcgaaacgcccgatccgcgcgcctccggcacgctggaagcgcac
tacgcgccgaacgccaagctgcggctgatggatgccaaggccatccaggccggcctcgac
gtgctcggcccgggtgcggcccacattgcggtgtggacgcgcgccgaggtgcgcagccat
tcccagcgcgtgctgcagcggcgcatgccggacgacgcggtggcgagcgcgcaccagctg
ttcgcggtgctgcgcgagttcgatgcgcagggcgtcaagctgatctgggtcgagacgccg
cccgacacgcccgaatgggaaggcgtgcgcgaccgccttcatcgcgcttcaatgggctaa
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