Variovorax paradoxus B4: VAPA_1c53300
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Entry
VAPA_1c53300 CDS
T02835
Name
(GenBank) transcriptional regulator, TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c53300
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VAPA_1c53300
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
FaeA
Phage_T7_Capsid
MerR
Motif
Other DBs
NCBI-ProteinID:
AGU52382
UniProt:
T1XHJ7
LinkDB
All DBs
Position
1:5598894..5599544
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AA seq
216 aa
AA seq
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MSIEESDGEAPATRGRSRKYTQVLGLINQAAIEVFASEGLAGASTQAIADKAGLSKAQLH
YYIESKEALYRQILQDILNDWIVVFGFADEAFGPRKVLGDLIHRKMVFSFEHPLRSRIFT
AEMMRGAPVLNTMMDTSKQRTDQAAAVIRNWMNQGLMDKADPMLVLFHIWAVTQFYADHA
TQAAYFRNVAQDGDDKDRRYLIEQVTEFLLKGAGVK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcgaagaaagcgacggcgaggcgcccgccacgcgcggccgctcgcgcaagtac
acgcaggtgctcggcctcatcaaccaggccgccatcgaggtgttcgcgagcgaggggctg
gccggtgcatcgacccaggccattgccgacaaggccgggctctcgaaggcgcagctgcac
tactacatcgagagcaaggaagcgctctaccggcagatcctgcaggacatcctcaacgac
tggatcgtggtgttcggcttcgccgacgaagccttcggcccgcgcaaggtgctgggcgac
ctgatccaccgcaagatggtgttctccttcgagcacccgctgcgctcgcgcatcttcacc
gccgaaatgatgcgcggggcgccggtgctcaacaccatgatggacacgagcaagcagcgc
accgaccaggccgccgccgtgatccggaactggatgaaccagggcctgatggacaaggcc
gacccgatgctggtgctgttccacatctgggccgtgacgcagttctatgccgaccacgcc
acccaggccgcctacttccgcaacgtggcgcaggacggcgacgacaaggaccggcgctac
ctgatcgagcaagtgaccgaatttctgctgaaaggcgcaggggtcaagtag
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