Variovorax paradoxus B4: VAPA_1c53430
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Entry
VAPA_1c53430 CDS
T02835
Name
(GenBank) putative membrane-bound lytic murein transglycosylase
KO
K08304
peptidoglycan lytic transglycosylase A [EC:
4.2.2.29
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpd01011
]
VAPA_1c53430
Enzymes [BR:
vpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VAPA_1c53430
Peptidoglycan biosynthesis and degradation proteins [BR:
vpd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VAPA_1c53430
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MltA
3D
Motif
Other DBs
NCBI-ProteinID:
AGU52395
UniProt:
T1XJT7
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All DBs
Position
1:complement(5614278..5615459)
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AA seq
393 aa
AA seq
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MNTSPAPRASSKIKPMRNGLQWLVGLAIVTTLAGCSIAPRAPDTPPRADVTPPRDLGPLT
GSLAHPKSRWVPVGWSELPGFGDDPLHEAWIALLANCARPNAAFAPLCRDVRQLAIATPE
EQRQWMTDRLQPYRVESLAGSSEGKLTSYYEPVYEASRVPTATFSVPIYQAPDGLVPRRP
WYTRQEIETLPEAQAALRGREIAWMADPIDALMLHIQGSGRLRITEANGIQRTVRVAFSA
TNEQPYKSVQQWLIAQGVAKVGKWPDDTKAWAAQNPQRVTQLLWSNPRYVFFREETMSEL
DAAFGPRGAQGVPLTAGRSIAVDRESIPYGTPVWLASSGPAAQLQKLVVAQDTGSAILGA
VRADYFAGTGADAGRLAASMNQPLRLWALWPKQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgagtccggccccaagggcttcaagcaaaatcaaacccatgagaaatggactc
cagtggctggttgggctcgcgatcgtaacaacgctggccggctgctcgatcgccccgcgc
gcgcccgacacgccaccccgcgccgacgttacgccgccgcgcgacctcggaccgctgacc
ggttcgctggcccatcccaagagccggtgggtgcccgtcggctggtccgagctgccgggt
ttcggcgacgacccgctgcacgaagcctggattgcgctgctcgccaattgcgcgcggccc
aacgccgcctttgcgccgctgtgccgcgacgtgcgccagctggccatcgccacgccggag
gagcagcgccagtggatgaccgacaggctgcagccctatcgcgtcgagtcgctcgcgggc
tcgagcgaaggcaagctcacgagctactacgagccggtgtacgaagcttcgcgcgtgccc
actgccactttcagcgttccgatctaccaggcgccggacggactggtcccgcgccggccc
tggtacacccggcaggaaatcgaaaccctgcccgaagcccaggccgcgctgcgcggccgc
gagatcgcatggatggccgaccccatcgacgcgctgatgctgcacatccagggctccggg
cgccttcgcatcaccgaggccaacggcatccagcgcaccgtgcgcgtggcgttctcggcc
accaacgagcagccgtacaagagcgtgcagcaatggctgatcgcccagggcgtggccaag
gtcggcaagtggcccgacgacaccaaggcatgggccgcgcagaacccgcagcgcgtgacg
cagctgctgtggagcaatccgcgctatgtgttcttccgcgaggaaaccatgagcgagctc
gacgctgccttcggcccgcgcggcgcgcagggcgtgccgctgacggcggggcgctccatt
gcggtcgaccgcgagagcattccgtacggcacgccggtctggctcgcgtcgagcgggccg
gcggcgcagctgcagaagctggtggtggcgcaggacaccggcagcgccatcctgggggcc
gtgcgcgcggactactttgccggcaccggtgccgatgcggggcgccttgccgccagcatg
aaccagccgctgcgcctgtgggcgctgtggcccaagcagtaa
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