Variovorax paradoxus B4: VAPA_1c53580
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Entry
VAPA_1c53580 CDS
T02835
Symbol
purB
Name
(GenBank) adenylosuccinate lyase PurB
KO
K01756
adenylosuccinate lyase [EC:
4.3.2.2
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00230
Purine metabolism
vpd00250
Alanine, aspartate and glutamate metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01232
Nucleotide metabolism
vpd01240
Biosynthesis of cofactors
Module
vpd_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
vpd_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VAPA_1c53580 (purB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VAPA_1c53580 (purB)
Enzymes [BR:
vpd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.2 Amidine-lyases
4.3.2.2 adenylosuccinate lyase
VAPA_1c53580 (purB)
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Motif
Pfam:
Lyase_1
ASL_C
Motif
Other DBs
NCBI-ProteinID:
AGU52410
UniProt:
T1XJU9
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All DBs
Position
1:5634374..5635753
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AA seq
459 aa
AA seq
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MSFSTVSALSPLDGRYAAKLAALRPLMSEQGYMHRRVQVEVAWFIALSDCGFAEFKPLTG
GARKYLLGLVSHFSEADALAIKDIEKTTNHDVKAVEYWIKSKFEARPELLAAAEFVHFAC
TSEDINNTSHALQIQAAREKVMLPAIDGLIAKLREMAHQFAGVSMLSRTHGQTASPTTVG
KEIANVAVRLSKARAQIASVQLLGKMNGAVGNYNAHLAAWPDFDWEAFSRKVIETPAPLG
LGLSFQPYSIQIEPHDYMAELFDAVARTNTILIDFSRDIWGYVSLGYFKQRLKKGEIGSS
TMPHKVNPIDFENAEGNLGLANAVLRHLSEKLPISRWQRDLTDSTVLRNIGVAFGYATLA
YASLATGLGKLELNEEALAEDLDASWEVLAEPIQTVMRRFGVQGAYEQLKEVTRGKTVTA
EALHGLIRSLDIPEAEKERLLAMTPASYTGKAAELASRI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctccaccgtttccgccctctccccacttgatggccgctatgcggccaaactc
gcggcattgcgcccgctgatgagcgaacagggctacatgcaccggcgcgtgcaggtcgaa
gtggcgtggttcatcgcgctgtcggactgcggttttgccgagttcaagcccctcacgggc
ggcgcccgcaagtacctgctggggctggtttcccacttctcggaggccgatgcactggcc
atcaaggacatcgagaaaaccaccaaccacgacgtgaaggcggtcgaatactggatcaag
tccaagttcgaagcccggcctgagctgctggccgccgccgagttcgtgcacttcgcctgc
accagcgaagacatcaacaacaccagccatgcgctgcagatccaggccgcacgcgagaag
gtgatgctgccggccatcgacgggctgattgccaagctgcgcgaaatggcgcaccagttc
gccggcgtctcgatgctgtcgcgcacgcatggccagaccgccagccccaccaccgtgggc
aaggaaatcgccaacgtggcggtgcggctctcgaaggcgcgcgcgcaaattgcctcggtg
cagctgctcggcaagatgaacggcgccgtgggcaactacaacgcccatctcgcggcctgg
cccgatttcgactgggaggcgttcagccgcaaggtgatcgaaacgccggcgccgctcggc
ctgggcctgagcttccagccctacagcatccagatcgagccgcacgactacatggccgag
ctgttcgacgcggtggcgcgcaccaacaccatcctgatcgacttctcgcgcgacatctgg
ggctacgtgagcctgggctacttcaagcagcggctcaagaagggcgagatcggctcctcg
acgatgccgcacaaggtcaacccgatcgatttcgagaatgccgagggcaacctgggcctg
gccaacgcggtgctgcgccacctgagcgagaagctgccgatcagccgctggcagcgcgac
ctcaccgacagcacggtgctgcgcaacatcggcgtggccttcggctatgccaccctggcc
tacgcgagcctggccacgggcctgggcaagctggagctcaacgaagaagcgctggccgaa
gacctcgacgcgtcttgggaagtgctggccgagccgatccagacggtgatgcgccgcttc
ggcgtgcagggcgcctacgagcagctcaaggaagtgacgcgcggcaagacggtgacggcc
gaggcgctgcacgggctgatccgctcgctcgacattccagaggcagaaaaggaacggctg
cttgccatgacgccggccagctacaccggcaaggcggcggagctcgccagtagaatctag
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