Variovorax paradoxus B4: VAPA_1c54080
Help
Entry
VAPA_1c54080 CDS
T02835
Name
(GenBank) putative biotin--[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00780
Biotin metabolism
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
VAPA_1c54080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c54080
Enzymes [BR:
vpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
VAPA_1c54080
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
Other families
VAPA_1c54080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_LplA_LipB_2
HgmA_N
Motif
Other DBs
NCBI-ProteinID:
AGU52460
UniProt:
T1XJZ8
LinkDB
All DBs
Position
1:complement(5687374..5688198)
Genome browser
AA seq
274 aa
AA seq
DB search
MDTKAGWFEDRIAAAVAPLLPGFAVEAVVEIDSTNTELMRRARAGRVAPVLLVAERQTAG
RGRLGRPWQSAQQSEEKTAASLTFSLGLPLAPRDWAGLSLAVGVSVAESLDPSGDAKVAL
KWPNDLWVNDRKLAGILIETAMPHTGRADVPAPPRYLVIGIGINIGPREADGMRTPPAWL
RQWRPDAAAPEVLAALAAPLVRSVQVFEAQGFAPFAERFAARDALRGREVQLSDGSFGLC
EGVAWGGELQVRTADGLQLVSSDEVSVRPRGMAF
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaggctggctggttcgaagaccggatcgccgcggcggtggcgccgctgctg
cccggcttcgcggtcgaggccgtggtcgagatcgattcgaccaacaccgagctgatgcgc
cgcgcgcgcgccggacgtgtcgcgccggtgctgctggtggccgagcgccagaccgcgggg
cgcggccggctcggccggccctggcagagcgcacagcagagcgaagaaaaaaccgccgcc
tccctcaccttctcgctgggcctgccgctcgcgccgcgcgactgggcgggcctctcgctg
gccgtgggcgtgagcgtggcggaaagcctcgatccctcgggcgacgccaaggttgcgctc
aagtggcccaacgacctgtgggtgaacgaccgcaagctggccggcatcctgatcgaaacc
gccatgccgcacacgggccgtgccgatgtgccggccccgccgcgctacctggtgatcggc
atcggcatcaacatcggcccgcgcgaggccgatggcatgcgcaccccgccggcctggctg
cgccagtggcgccccgatgccgccgcgcccgaggtgctggccgcgctggccgcgccgctg
gtgcgcagcgtgcaggtcttcgaggcgcagggcttcgcgccgtttgccgaacgctttgcc
gcgcgcgacgccttgcgcggccgggaggttcagctcagcgacggcagcttcggcctgtgc
gaaggcgtggcctggggcggcgagctccaggtgcgcacggccgacgggctgcagctggtc
tcgagcgacgaagtcagcgtgcgcccgcgcggcatggcgttctga
DBGET
integrated database retrieval system
