Variovorax paradoxus B4: VAPA_1c54170
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Entry
VAPA_1c54170 CDS
T02835
Name
(GenBank) transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c54170
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VAPA_1c54170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AGU52469
UniProt:
T1XJH3
LinkDB
All DBs
Position
1:complement(5698149..5699654)
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AA seq
501 aa
AA seq
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MQAALQKNHNWQDSWIHFFELAIRLPGAGSRNLLRELHRQLRVAILDGRLQPGARLPATR
ALAQRLGVSRNTMLAAYDLLLSEGYLLARPGAGTYVADTLPPSRRGRPSRTGSAAGRRDP
RLVPLNVPGADLAPTLQPQRSRDDFRVGLPDIGAFPFDIWRRLSDRALRRLAREPADYAD
PQGQAALREAIAKHVSFTRAVGCTAGDIVVTAGAQQAFGLLSRILVVPGRTVVAVEQLFY
PSLREAMTAAGAKVVAVPTDVEGLCVDRLPSEARVICVTPSHQFPTGVAMSPQRRAALLA
FARARHAVVIEDDYDSEFRFAGRPLDALQTLDRAESVFYVGTFSKSLFPALRLGFVVAPP
WARAALVRARELADWHGPVLEQEALAAFIAEGHLARHIRKMRKIYGARRTALLQALVRHG
AGRLEAIPSNAGLHLSAWLRGDTRADTVVERAAAAGITLPPLSRFALDPQAPGVPNGLAF
GYGLIGESQIDGAVRRLAALL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggcggctcttcaaaagaaccacaattggcaagattcatggatccactttttcgag
ctcgccatccgcctgccgggcgccggctcgcgcaatctgctgcgcgagctgcaccgtcag
ctgcgcgtcgccatcctcgacggccggctgcagcccggcgcgcgcctgcccgccacgcgc
gcgctcgcgcagcgcctgggcgtgtcgcgcaacaccatgctcgcggcctacgacctgctg
ctgagcgagggctacctgctggcgcgccccggggccggcacttacgtggccgacacgctg
ccgccgtcgcgccgcggccggccttcccgcacgggaagcgcggcgggccggcgcgacccg
cggctggtaccgctgaacgtgcccggcgccgacctcgcgcccacgctgcagccccagcgg
tcgcgcgacgacttccgcgtcggcctgcccgacatcggcgcctttcccttcgacatctgg
cgccgcctgtccgaccgcgcgctgcggcgcctggcgcgcgagccggccgactacgccgac
ccgcaaggccaggccgcattgcgcgaggcgatcgcaaagcacgtgtcgttcacgcgcgcg
gtcggctgcaccgccggcgacatcgtggtcacggccggtgcgcagcaggccttcgggctg
ctttcgcgcatcctcgttgtgccggggcgcacggtggtcgcggtcgagcagctcttctat
ccctcgctgcgcgaggcgatgacggccgcgggcgccaaggtggtcgccgtgccgaccgat
gtcgagggcctgtgcgtggaccgcctgccgtccgaggcgcgcgtgatctgcgtgacgccc
tcgcaccagttccccaccggcgtcgcgatgtcgccgcagcggcgcgcggcgctgctggcc
ttcgcacgcgcacgccatgcggtcgtgatcgaggacgactacgacagcgaattccgcttc
gccggccgcccgctcgacgcgctgcagacgctcgaccgcgccgagtcggtcttctatgtc
ggcaccttctcgaagagcctgttccccgcgctgcggctcggcttcgtggtcgcgccgccg
tgggcgcgcgcggcgctggtgcgtgcgcgcgagctggccgactggcatggcccggtgctg
gaacaggaggcgctggccgccttcattgccgaagggcacctggcgcggcacatccgcaag
atgcgcaagatctacggcgcgcgccgcacggccttgctccaagcgctggtgcgccatggc
gcaggccggctcgaagcgattccgtccaacgcggggctgcacctgtcggcctggctgcgc
ggcgacacgcgggccgacacggtggtcgagcgcgccgcggcagcgggcatcacgctgccg
ccgctgtcgcgcttcgcgctggacccgcaggcacccggcgtgcccaacggccttgcgttc
ggctacggcctgatcggcgaatcgcagatcgacggcgcggtccggcggctcgcggcgctg
ctctga
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