Variovorax paradoxus B4: VAPA_1c54280
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Entry
VAPA_1c54280 CDS
T02835
Name
(GenBank) putative FAD-dependent oxidoreductase
KO
K21061
D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00470
D-Amino acid metabolism
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VAPA_1c54280
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
FAD_binding_2
Thi4
FAD_oxidored
Pyr_redox_2
HI0933_like
3HCDH_N
FAD_binding_3
TrkA_N
Pyr_redox
ApbA
UDPG_MGDP_dh_N
GIDA
AlaDh_PNT_C
MurD-like_N
AdoHcyase_NAD
XdhC_C
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AGU52480
UniProt:
T1XK19
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All DBs
Position
1:complement(5707416..5708519)
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AA seq
367 aa
AA seq
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MHAEVIVIGAGIVGAACAHALAQAGRRVLVLDAHIGGATGAGMGHLVVMDDNPAELALSR
HSIAQWRALAPRMGEDCAYSACGTLWIAANEDEMAEAERKQQRLHAHGVDSRLLDAPALA
RAEPALRKGLAGALEVPGDGILYAPNAARWLLAQGGASICVEHAKVDAIEDDGTLQLADG
SRRSAPQVVLANGIEATTLCPELPIRPKKGHLLITDRYPGTVHHQLVELGYVTSAHHSDG
DSVAFNVQPRPTGQLLIGSSRQFGTTDPAVEAPMLARMLQRAIGYLPGLAELNAVRSWTG
LRAATPDGLPLLGKHPWREKLWLAVGHEGLGVTTAPGSAHLLAALMTGAAPGFDAAPYAP
RGLPETA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgccgaagtcatcgtcataggtgccggcatcgtcggtgccgcctgcgcgcatgcg
ctggcgcaggccggccgccgcgtgctggtgctcgatgcgcacatcggcggcgccaccggc
gcgggcatgggccacctggtggtgatggacgacaacccggccgaacttgcgttgagccgg
cattcgatcgcgcaatggcgcgccctggcgccgcgcatgggcgaggactgcgcgtacagc
gcctgcggcacgctctggatcgccgcgaacgaagacgaaatggccgaggccgagcgcaag
cagcagcggctgcatgcacacggcgtcgacagccgcctgctcgatgcgcccgcgcttgcg
cgcgccgagcccgccttgcgcaagggcctcgcaggcgcgctcgaagtgcccggcgacggc
atcctctatgcgccgaatgcggcgcgctggctgctcgcgcagggcggcgcctcgatctgc
gtcgagcacgcgaaggtcgatgccatcgaagacgacggcacgctgcagctcgccgacggc
agccgccgcagcgcgccgcaggtcgtgctggccaacggcatcgaggcgacgacgctgtgc
cccgaactcccgattcgccccaagaagggccatctgctgatcaccgaccgctacccgggc
acggtgcatcaccagctggtcgaactcggctacgtgacgagcgcacaccacagcgacggc
gattcggtcgccttcaacgtgcagccgcggcccacgggccaactgctgatcggctcctcg
cgccagttcggcaccaccgatccggccgtcgaagcgccgatgctcgcgcgcatgctgcag
cgcgcgatcggctacctgccggggctcgcggagctcaacgcggtccgctcctggaccggc
ctgcgcgccgcgacgcccgacgggttgccgctgctgggcaagcatccgtggcgcgagaag
ctctggctcgccgtcggccacgaaggcctgggcgtgaccaccgcgccgggcagcgcgcac
ctgctcgcggcgctgatgaccggcgccgcccctgggttcgacgcggcgccctatgcgccg
cgcggcttgccggagacggcatga
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