Variovorax paradoxus B4: VAPA_1c54520
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Entry
VAPA_1c54520 CDS
T02835
Name
(GenBank) putative amino-acid ABC transporter, permease protein
KO
K02029
polar amino acid transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c54520
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Putative polar amino acid transporter
VAPA_1c54520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
TetR_C_40
Motif
Other DBs
NCBI-ProteinID:
AGU52504
UniProt:
T1XJL4
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All DBs
Position
1:complement(5732983..5733663)
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AA seq
226 aa
AA seq
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MNYDWDFSGVWSHRDMLLAGFVGTMKIAAVAIALGVVFGVVLAALRLSGRAWLARPALWI
IEFYRNTPPLVHFFWAFYALPVLIGVSLDPYAAAVIALSTQSGAFFAEVFRGGLVSIERG
QWEAARAIGMRSHQALRRVVLPQALARMLPPFIERSFELIKTTALASTLAYSDLLYQAMQ
LNSITFRPLEVYTVVAAIFFLALFSLSLLARMAEHRLAVSTRAAGH
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgactgggacttcagcggcgtctggtcgcaccgcgacatgctgctcgcgggc
tttgtcggcacgatgaagatcgccgccgtcgccatcgcgctgggcgtggtgttcggcgtc
gtgctcgcggcccttcggctgtcgggcagggcgtggctcgccaggcccgcgctgtggatc
atcgagttctatcgcaacacgccgccgctggtgcacttcttctgggccttctacgcattg
ccggtgctcatcggcgtgagcctggacccgtacgcggcggcggtcatcgcgctgtcgacg
cagtccggcgcgttcttcgccgaggtgttccgcggcggcctggtgtcgatcgaacgcggg
cagtgggaagcggcgcgcgccatcggcatgcgctcgcaccaggccttgcgccgggtggtg
ctgccgcaggcgctcgcgcgcatgctgccgccgttcatcgagcgttcgttcgaactcatc
aagaccaccgcgctggcctccacgctggcctactccgacctgctctaccaggccatgcag
ctcaactcgatcaccttccggccgctggaggtgtacacggtggtcgcggccatcttcttc
ctggcgctgttctcgctgagcctgctcgcgcgcatggccgagcatcgcctggccgtttcc
acccgcgctgcaggacactga
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