Variovorax paradoxus B4: VAPA_1c54680
Help
Entry
VAPA_1c54680 CDS
T02835
Symbol
gapA
Name
(GenBank) glyceraldehyde-3-phosphate dehydrogenase GapA
KO
K00134
glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:
1.2.1.12
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00010
Glycolysis / Gluconeogenesis
vpd00710
Carbon fixation by Calvin cycle
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
vpd_M00002
Glycolysis, core module involving three-carbon compounds
vpd_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
vpd_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VAPA_1c54680 (gapA)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
VAPA_1c54680 (gapA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpd04131
]
VAPA_1c54680 (gapA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpd04147
]
VAPA_1c54680 (gapA)
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
VAPA_1c54680 (gapA)
Membrane trafficking [BR:
vpd04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
VAPA_1c54680 (gapA)
Exosome [BR:
vpd04147
]
Exosomal proteins
Proteins found in most exosomes
VAPA_1c54680 (gapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gp_dh_C
Gp_dh_N
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AGU52520
UniProt:
T1XK62
LinkDB
All DBs
Position
1:complement(5746864..5747865)
Genome browser
AA seq
333 aa
AA seq
DB search
MAIKLGINGFGRIGRNVLRAAVQNFKNEIEIVAINDLLEPDYLAYMLQYDSVHGRFKGEV
TVEGNTLIVNGKKIRLTQERDPAQLKWNEVGADIVLESTGLFLTKETCQKHLDAGAKKVI
MSAPSKDDTPMFVYGVNDKKYAGEAIVSNASCTTNCLAPLAKVLNDKWGIKRGLMTTVHA
ATATQKTVDGPSNKDWRGGRGILENIIPSSTGAAKAVGVVIPELNKKLTGMSFRVPTSDV
SVVDLTVELVKEATYKEICAEMKAQSEGALKGVLGYTEDKVVATDFRGDPRTSIFDAEAG
IALDSTFVKLVSWYDNEWGYSNKCLEMVKVVAK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaactcggtatcaacggcttcggtcgcatcggtcgcaacgtgctgcgcgca
gccgtgcagaacttcaagaacgagatcgagatcgtcgccatcaacgacttgctcgagccc
gactacctggcctacatgctccagtacgactcggtgcatggccgcttcaagggcgaagtc
acggtggaaggcaacacgctgatcgtcaacggcaagaagatccgcctcacgcaggagcgc
gacccggcgcaactgaagtggaacgaagtcggcgccgacatcgtgctcgaatccaccggc
ctgttcctcaccaaggaaacctgccagaagcatctcgacgcgggcgccaagaaggtgatc
atgtcggccccctcgaaggacgacacccccatgttcgtctacggcgtgaacgacaagaag
tacgccggcgaagccatcgtcagcaacgccagctgcaccaccaactgcctggcgccgctg
gccaaggtgctgaacgacaagtggggcatcaagcgcggcctgatgaccaccgtgcacgcc
gccaccgccacgcagaagaccgtggacggcccgagcaacaaggactggcgcggcggccgc
ggcatcctggaaaacatcattccctcgagcaccggcgccgccaaggccgtgggcgtggtg
atccccgagctcaacaagaagctcacgggcatgagcttccgcgtgccgacctccgacgtg
tcggtggtcgacctcacggtggagctggtgaaggaagccacctacaaggaaatctgcgcc
gagatgaaggcacagagcgaaggcgcgctcaagggcgtgctgggctacaccgaagacaag
gtggtggccaccgacttccgcggcgacccacgcacctcgatcttcgacgccgaagccggc
attgcgctcgacagcaccttcgtgaagctcgtgagctggtacgacaacgaatggggctac
tcgaacaagtgcctggagatggtgaaggtcgtggcgaagtaa
DBGET
integrated database retrieval system
