Variovorax paradoxus B4: VAPA_1c54860
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Entry
VAPA_1c54860 CDS
T02835
Symbol
lptD
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c54860 (lptD)
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c54860 (lptD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
Motif
Other DBs
NCBI-ProteinID:
AGU52538
UniProt:
T1XIZ2
LinkDB
All DBs
Position
1:complement(5767327..5769984)
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AA seq
885 aa
AA seq
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MAPCALAALPGETAGLLRNDAAGGLMSRRVALRRSGPPLPLALLSLALLHAHGASAQPAG
GLDGPLTLKRTPQLTETLPPAERSQLPSLITGDRLSGRQDLETVVEGHATLRRGEVAITA
DRLEYYQPDDRARARGNVRVNQAGNVYEGPELELKLETFEGFFNNVRYSFLATGGHGEAQ
RIDFVDSNVSVARSATYTTCRREDYPGWMPAWLLTAATMTTDTEENVGVATDARLSFMGI
STPPIPSVSFPLSNERKSGLLPPTIGIDNTNGIEISQPYYWNIAPNRDATFTPTLMSKRG
LNLGSEFRYLEKEYSGSIRMDLMGSDRLVGQRYNETRAAQLQQLANGEIQASDLSFGAPP
STKRWGIWANHHQDFNAKALGLDSLAANININRVSDNDYWRDFTRTPTLAQRQLSNDASL
NWSKGDWNGGIRALRYQTLQYSLSPIVPSYDRMPQITANYNKYDWHGFDVSLNLDYTRFR
VNTILAGQPGFDINQQSQPDGDRALAIASISRPFITPSSFVIPKLQLNTASYNYYLPQSD
VPKLTVNGIQYVNGVPYNPNSLYFFPTSSNRTVPTFSLDSGLIFERDASYFGRAFRQTLE
PRAYYVYTPFRNQSMLPNYDSAANDFSFATIYTENAFSGNDRISDTNTLTLGVTSRLIDP
ATGVEAARFGIAQRLRFSDQRVTLPGGTPVTDRASDLLLGAQINWTPKWSLDTVVQYNPD
TRKSERSAITARYNPEPYHNLSAAFRYQAPTTPTATDGNKSFDLGWQWPLNDLWGDKGKD
LGPGKGQGGGRWYAVGRLNYSLQDKKLTDGVLGFEYDGCCWIGRVVLQRITTGTVTANTR
IMFQLEFVGFSSIGSSPMQTLRTNIQRYQPLRQPTEGPSRFTNYD
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
ttggcaccctgtgcactcgcagccctccccggggagactgcgggccttctccggaacgat
gcggcgggaggcctgatgagccggcgcgttgccttgcggcgttccggcccgcccctgcca
ttggccttgctgtcgctggcgctgctgcatgcgcacggcgcatccgcccagccggcgggc
ggcctcgacggaccgctcacgctcaagcgcacgccgcaactgaccgaaacgctgccgccc
gccgaacgcagccagttgccgagcctcatcaccggcgaccgcctctcgggccgccaggac
ctcgaaaccgtggtcgagggccatgccacgctgcgtcgcggcgaggtcgccatcaccgcc
gaccggctcgagtactaccagcccgacgaccgtgccagggcgcgcggcaacgtgcgcgtc
aaccaggccggcaacgtgtacgaaggccccgagctcgaactcaagctcgaaaccttcgag
ggtttcttcaacaacgtgcgctactccttcctcgccactggcgggcacggcgaggcgcag
cgcatcgatttcgtcgacagcaacgtgtcggtggcccgcagcgccacctacaccacctgc
cggcgcgaagactatccgggctggatgccggcctggctgctgaccgcggccaccatgacc
accgacaccgaggaaaacgtcggcgtggccaccgacgcgcggctgagcttcatgggcatc
agcacgccgccgatcccgagcgtgagctttccgctgtcgaacgaacgcaagagcggcctg
ctgccgccgacgatcggcatcgacaacaccaacggcatcgagatctcgcagccgtactac
tggaacatcgcgcccaaccgcgacgccaccttcacgcccacgctgatgagcaagcgcggc
ctcaacctgggctcggaattccgctacctcgagaaggaatacagcggcagcatccgcatg
gacctgatgggcagcgaccgcctggtgggccagcgctacaacgaaacgcgcgccgcacag
ctgcagcagctcgccaacggggaaatccaggcctcggacctgagcttcggcgcgccgccc
agcaccaagcgctggggcatctgggccaatcaccaccaggatttcaatgccaaggcgctc
gggctcgattcgctcgcggccaacatcaacatcaaccgggtcagcgacaacgactactgg
cgcgacttcacgcgcacgcccacgctggcacagcgccagctgtcgaacgacgcgtcgctc
aactggagcaagggcgactggaacggcgggatccgtgcgctgcgctaccagacgctgcaa
tacagcctgtcgccgatcgtgccgtcctatgaccgtatgccgcagatcacggccaactac
aacaagtacgactggcacggcttcgacgtttcgctgaacctcgactacacgcgctttcgc
gtcaacaccatcctggccggccagccgggcttcgacatcaaccagcagtcgcagcccgac
ggcgaccgcgccttggcgattgcctcgatcagccggccgttcatcacgccgagttccttc
gtcattcccaagctgcagctgaacacggcttcgtacaactactacctgccccagtcggac
gttccgaagctcacggtcaacgggatccagtacgtcaacggcgtgccctacaacccgaac
tcgctgtatttcttcccgacctcgagcaaccggacggtgccgaccttcagcctcgacagc
ggcctgatcttcgagcgcgacgcgagctacttcgggcgtgccttccgccagacgctggag
ccgcgcgcgtattacgtctacacgccgttccgcaaccagagcatgctgccgaactacgat
tcggcggccaacgacttcagctttgccaccatctataccgagaacgccttctcgggcaac
gaccgcatttccgacaccaacacgctcacgctcggcgtcacctcccgcctgatcgacccc
gcaaccggcgtcgaggcggcgcgcttcggcattgcgcagcggctgcgcttcagcgatcag
cgggtcacgctgccgggcggcacgccggtgaccgaccgtgcgagcgacctgctgctgggc
gcccagatcaactggacgcccaagtggagcctggacacggtggtccagtacaaccccgac
acgcgcaagtcggagcgctcggccatcactgcgcgctacaaccccgagccgtaccacaac
ctgagcgcggcattccgctaccaggcgcccaccacccccaccgccacggacggcaacaag
tccttcgacctgggctggcagtggccgctcaacgacctgtggggcgacaagggcaaggac
ctcggcccgggcaagggccagggcggcgggcggtggtatgcggtgggccggctcaactac
agcctgcaggacaagaaactcaccgacggcgtgctcggcttcgagtacgacggctgctgc
tggatcggacgcgtggtgctgcagcgcatcacgaccggcacggtgacggccaacacgcgc
atcatgttccagctcgaattcgtcgggttctccagcatcgggtcgagccccatgcagacc
ttgcggacaaacatccagcgctaccagcctcttcgccagcccaccgaagggccgagccgc
ttcaccaattacgactga
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