Variovorax paradoxus B4: VAPA_1c55050
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Entry
VAPA_1c55050 CDS
T02835
Name
(GenBank) arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00540
Lipopolysaccharide biosynthesis
vpd01100
Metabolic pathways
vpd01250
Biosynthesis of nucleotide sugars
Module
vpd_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VAPA_1c55050
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpd01005
]
VAPA_1c55050
Enzymes [BR:
vpd01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
VAPA_1c55050
Lipopolysaccharide biosynthesis proteins [BR:
vpd01005
]
Lipid A
VAPA_1c55050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AGU52557
UniProt:
T1XI29
LinkDB
All DBs
Position
1:complement(5786237..5787235)
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AA seq
332 aa
AA seq
DB search
MSSAPLPPVVDADAILVRARATFDIESDAVLGLKSRVGPSFVDAVRRILDVRGRVVVMGM
GKSGHVGRKIAATLASTGTPAMFVHPAEASHGDLGMIKPVDLVLAISNSGEVDELTVILP
VVKRQGVPLIAMTGRTDSTLARHADIVIDAGVAKEACPLNLAPTASTTAQMAMGDALAVA
LLDARGFGSEDFARSHPGGALGRKLLTHVSDVMRSGDEVPRVAPTATLSELMREMSSKGL
GATAVVDAQGRAIGIFTDGDLRRQVETGGDLRGLTAADVMHPGPRTLRAEALAVEAAELM
EEHRITSVLIVDPEGLLIGALSINDLMRAKVI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagctcccctgccccccgtggtcgacgccgacgcaatcctggtgcgggcgcgc
gccaccttcgacatcgagtccgatgccgtgctcgggctcaagtcgcgcgtgggcccgagc
ttcgtcgacgccgtgcgcaggatcctcgacgtgcgcggccgcgtggtcgtcatgggcatg
ggaaaaagcggccatgtcggccgcaagatcgcagcgaccctggcctccaccggcacgccc
gccatgttcgtccatccggccgaggcgagccacggcgatctcggcatgatcaagccggtc
gacctggtgctggccatctccaacagcggcgaggtcgacgagctcaccgtgatcctgccg
gtggtcaagcgccagggcgtgcccctgatcgccatgaccggccgcaccgattccaccctc
gcgcgccacgccgacatcgtgatcgacgccggcgttgccaaggaggcctgcccgctcaac
ctcgcccccaccgcaagcaccacggcccagatggccatgggcgacgcgctggcggtggcg
ctgctcgacgcgcgcggcttcggctccgaagacttcgcgcgctcgcaccccggcggcgcg
ctgggccgcaagctgctcacgcacgtgagcgatgtgatgcgctcgggcgacgaagtgccg
cgcgtggcgcccaccgcaacgctcagcgaactgatgcgcgagatgagctccaagggcctg
ggcgccaccgccgtggtcgacgcgcaaggtcgcgccatcggcatcttcaccgacggcgat
ttgcgccgccaggtcgagaccggcggcgacctgcgcggcctgacggcggccgacgtgatg
caccccggcccgcgcacgctgcgtgccgaggcgctggcggtcgaggcggccgagctgatg
gaagaacaccgcatcaccagcgtgctcatcgtcgaccccgagggtctcctgatcggcgcg
ctcagcatcaacgacctgatgcgcgcgaaggtcatctga
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