Variovorax paradoxus B4: VAPA_2c00230
Help
Entry
VAPA_2c00230 CDS
T02835
Name
(GenBank) putative extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c00230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_2c00230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c00230
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_2c00230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_5
Peripla_BP_6
ANF_receptor
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AGU52588
UniProt:
T1XJ52
LinkDB
All DBs
Position
2:26067..27212
Genome browser
AA seq
381 aa
AA seq
DB search
MSTFTARTWRVGVLFSTTGVTAAVERTQQAATLLAIEEINESGGVLGRPIEPVIYDPASR
PKRYRELAKQLCDKDGVAVIFGGYMSSTRKAVLPVVEAHRALLFYPTLYEGFEYSPNCVY
TGAAPNQNSVQLVRYLTQHFGKRLFLVGSDYVYPYESNRIIADLFRQAGGEVLDEMYVPL
RVADIDMAKVIRRIKAAKPDVVYSTVVGDGIAHFYGAYREAGFDQRTHPIASQSTQEAEI
AQMAEGVAEGSITAAPYFSTLQSPANLRFVAAYRKRFGPDLPITACAEAAYFQVKLYAQT
LERAGDDRLDMMLPHLHEHEFDAPQGRVRIDQENHHTYLWPRVARVDASGTFQVVDDPGI
RVKPDPYMYESRFDPLAGRSA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacattcacagcgcgaacctggcgagtcggcgtcctgttctccaccacgggggtc
accgcggcggtggagcggacgcagcaggcggccaccctgctggcgatcgaggagatcaac
gagagcggtggcgtgctcggacggccgatcgaaccggtgatctacgacccggcgtcccgt
cccaagcggtaccgcgaactggcaaagcagttgtgtgacaaggacggcgtggcggtcatc
ttcgggggctacatgtccagcacgcgcaaggcggtgctcccggtggtcgaggcccatcgc
gcgctgctgttctacccgacgctctatgaaggcttcgagtattcgccgaactgcgtctac
accggcgcggcgcccaatcagaactcggtgcaactggtgcgctatctgacgcagcatttc
ggcaagcggctcttcctggtcggatcggactacgtctacccctacgagtcgaaccggatc
atcgcggacctgttccgccaggcgggcggcgaggtgctcgacgagatgtacgtgccgctg
cgcgtggcggacatcgacatggcaaaggtgatccggcggatcaaggcggccaagcccgat
gtggtctattcaaccgtcgtgggcgatggcatcgcccacttctacggtgcgtaccgcgaa
gccggtttcgaccagcgcacccatcccattgcgagccagtccacacaggaagcggagatc
gcccagatggccgaaggcgtggcggagggcagcatcacggcggcaccgtacttctcgacg
ctgcagagtcccgcgaacctgaggttcgtggcggcctaccgcaagcggttcggccccgac
ctgccgatcacggcctgcgccgaggccgcctacttccaggtgaagctctatgcgcagacg
ctggaacgcgcaggcgacgaccggctggacatgatgctgcctcacctgcacgaacacgag
ttcgatgcgccgcagggcagggtgaggatcgatcaggagaaccatcacacctatctctgg
ccgcgcgtcgccagggtcgatgccagcggcacgttccaggtggtggacgatccaggcatc
cgggtcaagcccgacccctacatgtatgagagccggttcgatccgcttgcgggccgctcg
gcctga
DBGET
integrated database retrieval system
