Variovorax paradoxus B4: VAPA_2c00630
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Entry
VAPA_2c00630 CDS
T02835
Name
(GenBank) putative branched-chain amino acid ABC transporter, substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c00630
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_2c00630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c00630
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_2c00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
LppC
Peripla_BP_3
BLYB
Motif
Other DBs
NCBI-ProteinID:
AGU52627
UniProt:
T1XIC4
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All DBs
Position
2:complement(67684..68793)
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AA seq
369 aa
AA seq
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MIKHFSSSLFAALLLSAGPTGAFAQGTVNVGAVLSLTGASATIGEDVRRGIMLGVDQVNS
KGGVLGKKFNVIVEDSGGNATTALNAARKLVGVDKVPVVMGEYSSSITLPVGQYLVKEGV
THLNINSSSIKLKDLGATSFGLLGLENYANSFSASDTFALGYRKVAVIAPNNAYGQGVLQ
GYKEAFEKLGGKVVTEVLYAAGQSTYRRELEQMSRSNPDAFVYTAYGQEAAVINREAHDL
GLRKTPWYAILLSMCVSDTPPEIANGQLGMELGAVQGPAGKAYAEAFTTKYKEGFKTAYT
GYGYDAVLMTAAAMEKARSADAAAIQAALKEIGQSYAGVTGVISFDANRQRLNPPYDRLK
YENGKIAQR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaacacttttcgtccagtctcttcgccgccctgctgctcagtgccggacctacc
ggcgccttcgcccagggcaccgtcaacgtgggcgcggtgctgtccctcacgggcgccagc
gccaccattggcgaggacgtgcgccgcggcatcatgctgggcgtcgaccaggtgaattcc
aagggcggcgtgctcggcaagaaattcaacgtgatcgtcgaagactcgggcggcaacgcg
acgacggcgctcaacgcggcacgcaagctggtcggcgtggacaaggtgccggtggtgatg
ggcgaatactcctcgagcatcacactgccggtggggcagtacctggtcaaggaaggcgtc
acgcacctcaacatcaacagcagcagcatcaagctgaaagacctcggtgctacctccttc
ggcctgctcgggctggagaactatgccaacagcttctcggcctccgacacctttgcactg
ggctatcgcaaggtcgcggtgattgcgcccaacaacgcctacggccagggcgtactgcag
ggctacaaggaagccttcgagaagctgggcggcaaggtcgtcaccgaagtgctctatgcc
gcggggcagtccacttatcgccgcgagctcgaacagatgtcgcgcagcaacccggacgcc
ttcgtctacaccgcgtacggccaggaggccgcggtgatcaaccgcgaagcgcacgacctg
ggcctgcgcaagacaccctggtacgccatcctcctgagcatgtgcgtgtcggacacgccg
cccgagatcgccaacgggcagctcggcatggagctcggcgcggtgcaggggcccgcgggc
aaggcctatgccgaagccttcacgacgaaatacaaggaaggcttcaagaccgcctacacc
ggctacggctacgacgccgtgctgatgaccgcggccgcgatggagaaggccaggtcggcc
gatgccgccgccatccaggccgcgctcaaggagatcggtcagtcgtacgcgggcgtcacc
ggcgtcatcagcttcgacgccaaccggcagcgcctcaacccgccctacgaccgtctcaag
tacgaaaacggaaagatcgcgcagcgctga
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