Variovorax paradoxus B4: VAPA_2c00710
Help
Entry
VAPA_2c00710 CDS
T02835
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00521
Streptomycin biosynthesis
vpd00523
Polyketide sugar unit biosynthesis
vpd00541
O-Antigen nucleotide sugar biosynthesis
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01250
Biosynthesis of nucleotide sugars
Module
vpd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VAPA_2c00710 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VAPA_2c00710 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VAPA_2c00710 (rmlC)
Enzymes [BR:
vpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VAPA_2c00710 (rmlC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AGU52635
UniProt:
T1XKI7
LinkDB
All DBs
Position
2:75380..75925
Genome browser
AA seq
181 aa
AA seq
DB search
MKATPTAIPEVLIIEPKVFGDARGFFYESFNGKAFDEAVGRHIEFVQDNHSRSAKGVLRG
LHYQIQQPQGKLVRVAQGEVFDVAVDIRKSSPTFGKWVGVELSEDNHRQLWVPEGFAHGF
LVLSETAEFLYKTTDYYAPVHERCIAWNDPGLAIAWPDTGVGLQLSLKDLAGARLENAEI
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccacgccgaccgccattcccgaggtgctgatcatcgagccgaaggtcttcggc
gatgcgcgcggcttcttctacgagagcttcaacggcaaggcgttcgacgaggcggtcggg
cggcacatcgagttcgtgcaggacaaccattcgcgctcggccaagggcgtgctgcgcgga
ttgcactatcagattcagcagccgcaaggcaagctggtgcgtgtggcgcagggcgaagtg
ttcgacgtggccgtggacatccgcaagtcgtcgcctaccttcggaaaatgggtgggggtg
gagctcagcgaggacaaccacaggcagctgtgggtgcctgaggggtttgcgcacggattc
ctggtgctgagcgagacggcggagtttttgtacaagaccactgattactatgcgccagtg
catgagcggtgcatcgcatggaacgaccccggcttggcgatcgcgtggccggataccggc
gtcggcctgcaactctcactcaaggatctggctggcgcaagactggaaaacgcagaaatc
ccgtag
DBGET
integrated database retrieval system
