Variovorax paradoxus B4: VAPA_2c00710
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Entry
VAPA_2c00710 CDS
T02835
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00521
Streptomycin biosynthesis
vpd00523
Polyketide sugar unit biosynthesis
vpd00541
Biosynthesis of various nucleotide sugars
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01250
Biosynthesis of nucleotide sugars
Module
vpd_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VAPA_2c00710 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VAPA_2c00710 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VAPA_2c00710 (rmlC)
Enzymes [BR:
vpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VAPA_2c00710 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AGU52635
UniProt:
T1XKI7
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All DBs
Position
2:75380..75925
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AA seq
181 aa
AA seq
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MKATPTAIPEVLIIEPKVFGDARGFFYESFNGKAFDEAVGRHIEFVQDNHSRSAKGVLRG
LHYQIQQPQGKLVRVAQGEVFDVAVDIRKSSPTFGKWVGVELSEDNHRQLWVPEGFAHGF
LVLSETAEFLYKTTDYYAPVHERCIAWNDPGLAIAWPDTGVGLQLSLKDLAGARLENAEI
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccacgccgaccgccattcccgaggtgctgatcatcgagccgaaggtcttcggc
gatgcgcgcggcttcttctacgagagcttcaacggcaaggcgttcgacgaggcggtcggg
cggcacatcgagttcgtgcaggacaaccattcgcgctcggccaagggcgtgctgcgcgga
ttgcactatcagattcagcagccgcaaggcaagctggtgcgtgtggcgcagggcgaagtg
ttcgacgtggccgtggacatccgcaagtcgtcgcctaccttcggaaaatgggtgggggtg
gagctcagcgaggacaaccacaggcagctgtgggtgcctgaggggtttgcgcacggattc
ctggtgctgagcgagacggcggagtttttgtacaagaccactgattactatgcgccagtg
catgagcggtgcatcgcatggaacgaccccggcttggcgatcgcgtggccggataccggc
gtcggcctgcaactctcactcaaggatctggctggcgcaagactggaaaacgcagaaatc
ccgtag
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