Variovorax paradoxus B4: VAPA_2c01290
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Entry
VAPA_2c01290 CDS
T02835
Name
(GenBank) putative citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00020
Citrate cycle (TCA cycle)
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
vpd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VAPA_2c01290
00630 Glyoxylate and dicarboxylate metabolism
VAPA_2c01290
Enzymes [BR:
vpd01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
VAPA_2c01290
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Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
DUF6197
Motif
Other DBs
NCBI-ProteinID:
AGU52692
UniProt:
T1XII0
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Position
2:complement(125418..126566)
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AA seq
382 aa
AA seq
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MASWISMTEACNLLGVQPQTIYAYVSRGKLEVMPDPADTRRRLYRAEDVAGLARRKQAGR
KHETLAANTLFGSEPSIPTALCAFSRGRPYYRGRDAVHMARTATLEDAAQLLWAAERTVD
FSCSTPMRSGKPGRGAAFAALASLAAAGHSTGGRLTRVLHAEGQGLVGQLANAFGASPDH
EPLHLRFAKGWKQSSKVADLLRTALVLLADHELTSSAFVARIAASTGASLPACLLAGLTT
LSGPLHGDASGRVRALFSEVERLGEDQVLAHYLSNGLSLAGFGHHLYPDGDPRAAALLAL
FEPPKVIARFIAKVTKLTGLQPNIDVALAAMVAHHRLPADAAFGLFATARSVGLLAHSLE
QLGVAQVIRPRGRYVGPMPEPA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctggatttcaatgaccgaggcgtgcaacctcctgggtgtgcagccgcagacg
atctacgcgtacgtgagccgcggcaagctggaagtcatgcccgacccggccgacacgcgg
cgcaggctgtaccgcgccgaggacgtggccggcctggccaggcgcaagcaggccggccgc
aagcacgagacgctggccgccaacacgctgttcgggtcggagcccagcattccaacggcc
ctgtgtgcgttttctcgcgggcggccgtactaccggggccgggacgccgtgcacatggcc
cgaacggccacgctggaagatgcggctcaactcttgtgggccgccgagcgcaccgtcgat
ttctcctgctcgacgcccatgcgctccggcaagcccgggcgaggcgcggccttcgccgcc
ttggccagcctggcggccgccgggcattccaccggtgggcgcctgacccgggtgctgcat
gccgagggccagggcctggtgggccagttggccaacgcgttcggcgcttcaccagaccac
gaaccgctgcatctgcgctttgcgaaagggtggaagcaatcttccaaggtggctgatctg
ctgcgaacagccttggtgctgctggccgatcacgaactgaccagttcagcctttgtcgcg
cgcattgccgcgtctaccggcgcttccttgccggcatgcctgctggccgggttgaccact
ctctcaggccccctgcatggcgatgcctcgggccgcgtccgggcactgttcagcgaggtg
gagcgactgggagaggaccaggtgctggcccactacctgtcgaatggtttgtcgctggcc
ggatttggccatcacctctatcccgatggcgatccccgcgccgccgcattgctggccttg
ttcgagcctcccaaggtgatcgcgcgcttcatcgcaaaggtgacgaagctgaccgggttg
cagcccaacatcgacgtcgccctggccgccatggtcgctcaccatcgacttcctgccgat
gcggcctttggcctgttcgcaacggcgcgcagcgtcgggctgttggcgcacagcctggag
cagttgggtgtggcgcaagtcatccgcccgcgcgggcgctatgtggggccgatgcccgag
cccgcatga
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