Variovorax paradoxus B4: VAPA_2c02070
Help
Entry
VAPA_2c02070 CDS
T02835
Name
(GenBank) putative transposase
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_21
rve_2
HTH_Tnp_1
HTH_28
rve_3
HTH_23
DUF7660
HTH_22
Tektin
CENP-B_N
HTH_Tnp_1_2
DivIC
Motif
Other DBs
NCBI-ProteinID:
AGU52769
UniProt:
T1XKD8
LinkDB
All DBs
Position
2:complement(201301..202839)
Genome browser
AA seq
512 aa
AA seq
DB search
MYSYEDRIRAVELYIKLGKRVRPTIRQLGYPTKNSLKGWYNEYQQKLDLPAGYAGRRPKF
SQEQKAAAIEHYLTHDRCIAATMRALGYPGRGTLTAWVREAIPEVRRAVVGSVGRRRYSG
ELMQAGVMELCTREESAQAVADKFGVCRPTLYNWKNQLLGREAPASMKSTNQSPPSQERD
ELERQVESLRREVRQLRLEQDLLNKANELLKKGLGVDLQLLSNREKTLLIDALREHYGLP
ELLAQLDLARSSYFYHRARAAVGDKYLEVRQSITDIFESNHRCYGYRRLQASLTRQDVAI
SEKVVQRLMKQESLVVPKPRKRRYASYLGEISPAPENLINRDFQAVVPNEKWLTDITEFQ
IPAGKVYLSPIIDCFDGMVVSWTIGTSPDAELVNTMLDAAIETVAETTHRPVVHSDRGGH
YRWPGWLSRMSDANFTRSMSRKACSPDNAACEGFFGRLKNELFYPRDWKNSTIEQFIEAV
DSYIRWYNEKRIKISLGSLSPIEYRVSLGLAA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtattcctacgaagatcggattcgagccgttgagctctacatcaagcttggcaaacgc
gtcagacccactatccgtcagctgggttatccaacaaaaaattctctgaagggctggtac
aacgaataccagcagaagcttgacttgccagcgggctatgcgggccggagacccaagttc
tcgcaggagcaaaaagcggcagctatcgagcactacctcactcacgaccgctgcattgct
gccaccatgagggcattgggctaccccggcagagggacactgaccgcgtgggttcgcgag
gccattcctgaggtcagaagggctgtcgttggcagtgtggggcgacgaaggtattccggg
gagctgatgcaagcgggagtcatggagctttgcacgcgtgaggaaagtgcgcaggctgta
gccgacaagttcggcgtgtgccggccaacgctgtacaactggaagaaccaacttctggga
cgtgaggcacccgcatccatgaaaagcaccaatcaatctccgccgtcgcaagagcgcgac
gagctcgagcgtcaggttgagtcgctgcgccgcgaagtcaggcaacttcgccttgagcag
gacctcttgaacaaggccaacgaactgttaaaaaaaggcctgggcgtcgacctgcagctc
ctgtccaaccgggagaagacactgctgattgacgccctcagggagcactatggcctgcca
gagctccttgcacagttggatcttgcgcgtagttcgtacttctaccatcgggcacgtgca
gcggtgggcgacaagtacctggaggtgcggcaatccatcaccgacatctttgagtcgaac
caccgctgctatggctaccgcaggctgcaagcttcgctcactagacaggacgtcgcgatc
tccgagaaggtcgtgcagcggttaatgaagcaggaaagcctggttgttccaaagcccagg
aagcgcaggtatgcgtcataccttggcgagatcagtccagcgcctgagaacctcatcaac
cgcgacttccaggccgtggtccccaacgagaaatggctcacggacatcacggagttccag
atcccggctggcaaggtgtacctctcgcccatcatcgactgcttcgatggaatggtcgtc
agctggaccattgggaccagtccggacgctgagttggtcaacacgatgctggatgcagcc
atcgagacagtggccgaaactactcaccggcctgtggttcactccgatcggggcggccac
taccgctggccaggttggctatcaagaatgagcgacgctaacttcacccgctcgatgtct
cgcaaggcatgctcacctgataacgcagcttgcgaaggcttcttcggtcggctgaagaac
gaactgttctatcctcgagactggaagaactccaccattgagcaattcatcgaggcggtc
gactcgtacatccgttggtacaacgagaagcggatcaagatctctcttggctctctcagc
cctatcgaataccgggtgagccttggacttgcggcataa
DBGET
integrated database retrieval system
