Variovorax paradoxus B4: VAPA_2c02210
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Entry
VAPA_2c02210 CDS
T02835
Name
(GenBank) transcriptional regulator, LysR family
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_2c02210
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAPA_2c02210
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AGU52783
UniProt:
T1XJM8
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All DBs
Position
2:223433..224374
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AA seq
313 aa
AA seq
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MGPGNRPLDLEWLEDFLALAESGNFSRAAQARSIAQPAFSRHIRALEEWVGVDLFDRSAH
PAALTAAGKRFQPLLQEVLAALEAARIKARAAHDMAAASLSFAATHVLSLTFFPRWLGRV
EARLSLGPIQTISDSSQACEDLMLQRRVQFVLCHGHAGALGRLDEAQYPMQRLSDDVLVP
VAAPDARGLPQHALGTGQAPSVLAYSEASGLGRIMRAIQDSEFGKDFAPSLLVVFTAHHA
ALLRTMALEGRGLAWLPMSLVADDLRGGALVDAGAGGWRVPVDIRLYRQLAHMAPVAEAL
WQLVKDGAAVPGA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggccccggcaaccgacccctcgacctcgaatggctggaagacttcctggccctggcc
gagagcggcaatttctcgcgcgcggcgcaggcgcgttccatcgcccagccggccttcagc
cgccacatccgcgcgctcgaggaatgggtgggcgtcgacctgttcgaccgcagcgcgcac
ccggccgcgctcacggcggcgggcaagcgcttccagccgctgctgcaggaggtgctggcc
gcgctggaggcggcgcgcatcaaggcgcgcgcggcgcacgacatggccgcggcgagcctg
agcttcgccgccacgcacgtgctgtcgctgaccttctttccgcgctggctgggccgcgtg
gaagcgcggctgagcctggggccgatccagaccatctccgacagttcgcaagcctgcgaa
gacctgatgctgcagcgacgcgtgcagttcgtgctgtgccacggccatgcgggtgcgctc
ggccggctcgacgaagcgcaataccccatgcagcggctgagcgacgacgtgctcgtgccg
gtggcggcgccggatgcgcgcggcctgccgcagcacgcgctgggcacggggcaggcgcct
tcggtgctggcctacagcgaggcctcggggctggggcggatcatgcgggcgatccaggac
agcgagttcggcaaggacttcgcgccttcgctgttggtggtcttcacggcgcaccatgcc
gcgctgctcaggaccatggcgctcgaaggacgcggcctcgcgtggctgccgatgagcctg
gtggcggacgacctgcgcggcggcgcgctggtggatgccggcgcgggcggctggcgggtg
ccggtggacatccggttgtaccggcagctggcccacatggcgccggtggccgaggcgctg
tggcagctggtgaaggacggcgctgcggtgcccggcgcctga
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