Variovorax paradoxus B4: VAPA_2c03290
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Entry
VAPA_2c03290 CDS
T02835
Name
(GenBank) putative blue-light-activated protein
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
GAF
GAF_2
PAS_9
GAF_3
Response_reg
HisKA
PAS
PAS_4
Diguanyl_cycl_sensor
PAS_8
Motif
Other DBs
NCBI-ProteinID:
AGU52890
UniProt:
T1XL69
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All DBs
Position
2:complement(332730..334835)
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AA seq
701 aa
AA seq
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MNPPSSPIAPPLPGLPSGVEESSVFRSLFISYPDSLLLVDQAGRIVLANPSAANLLGYTV
HELVGLNVDALVPDSIRPRHASYREAYGRAPRPRPMGTQMELVAKRKDGSEVMVEIALSP
LQSQGLPFVVAAIRDIGAYPRVKQALQRARYSDHLAQLGRLAVDTRDLQVVLDHVPAMAA
EALEVEVAMVLLLENSRLEFRVASGVGLVPGEEIGARIPSHANTPPGFVFAEGQPVVVPD
YREERRFAVPQAYLDAGLVSALAVPFYDRGRFIGVLTVRSREAKRFGDEELRFLESLSNL
LATSLQRVQTEEALSHAQRLESVGQLTGGIAHDFNNLLTVIQGNLQVLEELPAIAQDGYA
QQLVGAAARASRRGAELTGKLLAFSRRQMLQPNAVDTHAMLHSLADMLRRTLDQRIGIAI
DAAPGCPPVLADPGQLESALLNIAINARDAMPEGGTLHFRAAACGALPPEVHNELSDHDA
HGSFVAISVVDNGTGMTEEVKERAFEPFFTTKEAGRGTGLGLSAVYGFVKQSKGAVAIAT
RPGAGTTVTLYLPQLYDPAPAAAEEEEDGEQAIPVGLRVMLVEDDAEVRRVVHTFLVTLG
CSVVTAGNAEQALLSMETDAGSFDVLLSDIALGPGMRGTRLATEAQQRFPRLAILLMSGF
SSELLDADRDVPQSWELLRKPYTRGELARALAKVLAAARPS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgccctcttccccgatcgccccccccttgccgggactgccttcgggcgttgaa
gagagcagcgtcttccgttcgctcttcatttcctacccggactcgctgctgctggtcgac
caggccggccgcatcgtgctggccaacccctcggcagccaacctgctgggctacacggtc
cacgaactggtgggactgaacgtcgacgcgctggtgcccgacagcatccgcccgcgccac
gcttcctaccgcgaggcctacggccgggcgccacgccccaggcccatgggcacgcagatg
gagctggtcgccaagcgcaaggacggcagcgaggtgatggtcgagatcgcgctcagcccg
ctgcaaagccagggcctgcccttcgtcgttgccgccatccgcgacatcggcgcctatccc
cgcgtgaagcaggcgctgcagcgtgcgcgctacagcgaccacctcgcgcagctgggccgg
ctggccgtggacacccgcgacctgcaggtggtgctcgaccacgtgcccgccatggccgcg
gaagcgctggaggtcgaagtggccatggtgctgctgctggagaacagccgcctcgaattc
cgcgtggccagcggcgtgggcctggtgcccggagaggaaatcggcgcgcgcattcccagc
catgcaaacacgccgcccggcttcgtgtttgccgagggacagccggtggtggtgcccgac
taccgcgaagagcggcgcttcgcggtgccgcaggcgtacctggacgccggactggtcagc
gcgctggccgtgcccttctacgaccggggccggttcatcggcgtgctgaccgtgcgatcg
cgcgaggccaagcgcttcggcgacgaagagttgcggttcctcgaatcgctctccaacctg
ctggccaccagcctgcagcgggtgcagaccgaagaggcgctcagccacgcccagcggctc
gaaagcgtcggccagctcacgggcggcatcgcgcacgacttcaacaacctgctcaccgtc
atccaaggcaacctgcaggtgctcgaagagctgcccgccattgcgcaggacggctacgcc
cagcagctggtgggggccgcggcgcgggcatcgcggcgcggcgccgagctcacgggcaag
ctgctggcgttttcgcgccggcagatgctgcagcccaacgcggtggacacgcatgcgatg
ctgcattccctggccgacatgctgcggcgcacgctcgaccagcgcatcggcatcgcgatc
gacgccgcgccgggttgcccgccggtgctcgccgaccccggtcagctcgaatcggcattg
ctgaacattgccatcaacgcccgcgacgccatgcccgaaggcggcacgctgcactttcgc
gccgcggcctgcggcgcgctgccgccggaggtgcacaacgagctcagcgaccatgacgca
cacggcagtttcgtggccatctcggtggtcgacaacggcacgggcatgaccgaggaagtg
aaggagcgcgccttcgagcccttcttcacgaccaaggaagccggccggggcaccggcttg
ggcctgagcgcggtgtacggcttcgtgaagcagtccaagggcgccgtggccatcgcgacg
cggccgggcgcgggaacgaccgtgacgctctatcttccccagctgtacgacccggctcct
gcggctgcagaggaggaagaagacggcgaacaggcgattcccgtcggcctgcgggtcatg
ctggtcgaggacgacgccgaagtgcgcagggtcgtccacacatttctcgtgacgctcggc
tgcagcgtggtgaccgcgggcaatgccgagcaggccttgctgagcatggaaacggatgcg
ggctccttcgacgtgctgctcagcgacatcgcgctcgggcccggcatgcgcggaacccgg
ctcgccaccgaggcgcagcagcgctttccccggctcgcgattctcctgatgtccggcttc
tcgtcggagctgctcgacgccgaccgcgacgtgccgcaaagctgggagctgctgcgcaag
ccctacacgcgcggcgaactcgcgcgcgcattggccaaggtactggcggccgcacggccc
agctag
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