KEGG   Variovorax paradoxus B4: VAPA_2c04080
Entry
VAPA_2c04080      CDS       T02835                                 
Name
(GenBank) two component transcriptional regulator, winged helix family
  KO
K07666  two-component system, OmpR family, response regulator QseB
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd02020  Two-component system
vpd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VAPA_2c04080
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VAPA_2c04080
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vpd02022]
    VAPA_2c04080
Two-component system [BR:vpd02022]
 OmpR family
  QseC-QseB (quorum sensing)
   VAPA_2c04080
SSDB
Motif
Pfam: Trans_reg_C Response_reg Phage_integrase OKR_DC_1_N
Other DBs
NCBI-ProteinID: AGU52968
UniProt: T1XK59
LinkDB
Position
2:409792..410463
AA seq 223 aa
MRILLAEDDPLLGDGLRAGLRQLGFQVDWVRDGEAAERELRAEPYAAAVLDLGLPLRDGL
RVLADVRRAGIKIPILVLTAREGVPDRVRGLDVGADDYVVKPVDLHELAARLRALIRRAH
GQPQERLRAQDVELDPAAHTVHRAGRLVALPSREFALLHALMLNAGRVLSREQLEQNLYS
WGQEVESNAVEVHVHHLRRKLGASLIQTVRGVGYVLLRERPGH
NT seq 672 nt   +upstreamnt  +downstreamnt
atgcgcatcctcctggccgaagacgatcccttgctcggcgatggtctccgcgcgggcctg
cgtcagctcggtttccaggtcgactgggtgcgggacggcgaagccgccgaacgcgaactg
cgcgccgagccgtatgcggcggcggtgctcgacctgggcctgcccctgagggacggcctg
cgcgtgcttgccgacgtccggagggcgggtatcaagatccccatcctggtactgacggcg
cgcgagggcgtacccgatcgcgttcgcgggctcgatgtcggcgccgatgactacgtcgtc
aagcccgtcgacctgcatgaactcgcagcgcgcctgcgcgccctgatccgccgcgcccat
ggtcaaccccaggaacgccttcgcgcccaggatgtcgaactcgatcccgccgcgcacacg
gtgcatcgtgcgggtaggctggtcgcgctgccgtcgcgcgaattcgcgctgctgcacgcg
ctgatgctcaatgccggacgcgttctctcgcgcgaacagctcgagcagaacctgtacagc
tgggggcaggaagtggaaagcaatgcggtcgaggtgcacgtgcatcatctgcgccgcaag
ctcggcgcctcgctgatccagaccgtgcgcggcgtgggctatgtgctcctgcgcgaaagg
ccgggccattga

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