KEGG   Variovorax paradoxus B4: VAPA_2c04470
Entry
VAPA_2c04470      CDS       T02835                                 
Name
(GenBank) putative ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00230  Purine metabolism
vpd00240  Pyrimidine metabolism
vpd01100  Metabolic pathways
vpd01232  Nucleotide metabolism
Module
vpd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
vpd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    VAPA_2c04470
   00240 Pyrimidine metabolism
    VAPA_2c04470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpd03400]
    VAPA_2c04470
Enzymes [BR:vpd01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     VAPA_2c04470
DNA repair and recombination proteins [BR:vpd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    VAPA_2c04470
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN RNR-II_ins_dom TSCPD
Other DBs
NCBI-ProteinID: AGU53007
UniProt: T1XJE6
LinkDB
Position
2:complement(445924..448329)
AA seq 801 aa
MKREDARKMEPLPVQPISRDVLREKYLKPGEADVEDLFARVARALASVETEEERAPWEAR
FLANLRAGAIGAGRIMSAAGTELEATLINCFVQPVGDCIQGQDAGGYAGIYEALREAAET
MRRGGGVGYDFSRIRPRGAQVRTTASTASGPCSYIDVFDRSCATVESAGARRGAQMGVLR
IDHPDVLDFITAKRTPGRWNNFNVSVAVTDKFMRALADDEEWPLVHSAKPGAELIARGAA
QASDGSWVYRSLPARDLWDVVMRSTYDFAEPGILFTDTINNDNNLRYCEHIEATNPCGEQ
PLPPYGCCDLGPIVLTRFVDHPFGIGGTAHFDFARFGEAVALQVRALDNVLDLTFWPLPQ
QRAEAMAKRRIGVGFTGLGDTLAMLCLRYDQPEGRAMAVRIARCLRDAAYAASVALAREK
GAFPLFDAERYLARGTFASRLDLALQEQIRMHGIRNSHLVSIAPTGTVSLAFADNASNGI
EPAFSWTYRRKKREADGSLSEYDVEDHAWRLYRFLGGDTERLPAYFVSAQSMPAAGHLAM
MEAVQPFVDTAISKTVNVPADYPYEDFKGLYLQAWTARLKGLATYRPNSILGSVLEVAPA
AQPEARPAADGAAADPMRAMIESRPKGALNAVAEKIEYWTQQGRQTLYLVVSFLPLADGR
ERAVEFFMPVGQSGESQQWITASMRLLSLAARGGFLERALADMRKVAWDRGPVRLGHHVK
ADGTQVPMWHDSEVGAIAYAIQQLIARRSGQVPAAPDAAAPPMAGLTPMQGAKCPECGAH
AMIRKDGCDYCTQCGHLGSCG
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgaagcgcgaagacgccagaaagatggaaccgctccccgtacagcccatcagccgcgac
gtgctgcgcgaaaaatacctgaagccgggcgaagccgacgtcgaggatctgttcgcgcgc
gtggcgcgtgcgctggcctcggtcgaaaccgaggaagaacgcgcgccatgggaggcgcgc
ttcctggccaacctgcgcgccggcgcaatcggcgccggccgcatcatgagcgccgcgggc
accgagctggaggccacgctgatcaactgcttcgtgcagccggtgggcgactgcatccag
ggccaggacgccggtggctacgcgggcatctacgaggcgctgcgcgaagccgccgaaacc
atgcgccgcggcggcggcgtcggctacgacttctcccgcatccggccgcgcggcgcacag
gtgcgcaccactgcgtccacggcatcgggtccgtgcagctacatcgacgtgttcgaccgc
tcctgcgccacggtggaaagcgcgggcgcgcgccgcggcgcgcagatgggcgtgctgcgc
atcgaccaccccgacgtgctggatttcatcacggccaagcgcaccccggggcgctggaac
aacttcaacgtgtcggtggcggtgaccgacaagttcatgcgcgcgctggcggacgacgag
gaatggcccctggtgcacagcgccaaaccgggcgccgaactgatcgcgcgcggcgcggcc
caggccagcgatggcagctgggtctaccgaagcctgccggcgcgcgatctgtgggacgtg
gtgatgcgctcgacctacgacttcgccgagcccgggatcctgttcaccgacaccatcaac
aacgacaacaacctgcgctactgcgagcacatcgaggcgacgaacccctgcggcgagcag
ccgctgccgccctacggatgctgcgacctcgggccgatcgtgctgacgcgcttcgtggac
catccgttcggcatcggcggtacggcgcacttcgatttcgcgcgcttcggcgaagccgtg
gcgctgcaggtgcgcgcgctcgacaacgtgctggacctcaccttctggcccctgccccag
cagcgcgccgaagccatggccaagcgccgcatcggcgtgggcttcacgggcctgggcgac
acgctcgccatgctgtgcctgcgctacgaccagcccgagggccgggccatggcggtgcgc
atcgcgcgctgcctgcgggatgcggcctacgccgcctcggtggcgctggcgcgcgagaaa
ggcgccttcccgctgttcgacgcggagcgctacctggcgcgcggcaccttcgccagccgc
ctggacctggcgctgcaggaacagatccgcatgcacggcatccgcaacagccacctggtg
tcgatcgcgcccacgggcaccgtgagcctggccttcgccgacaacgcctcgaacggcatc
gagccggcgttctcctggacctaccggcgcaagaagcgcgaggccgacggcagcctctcc
gagtacgacgtggaggaccacgcctggcgcctgtaccgcttcctgggcggcgacaccgaa
cggctgccggcgtacttcgtctcggcccagtcgatgcccgcggccggccatctggccatg
atggaagcggtgcagcccttcgtcgacaccgccatctcgaagacggtgaacgtgcccgcc
gactatccctacgaggacttcaagggcctctacctgcaggcctggaccgcccgcctcaag
ggcctggccacctaccggcccaacagcatcctgggctccgtgctggaggtcgcgccggca
gcgcagccggaggcccgccccgccgccgacggcgcggcggccgatccgatgcgcgcgatg
atcgagagccgcccgaagggcgccttgaatgccgtcgccgaaaagatcgagtactggacg
cagcaggggcggcagacgctctacctggtggtgtcgttcctgccgctggccgacggccgc
gagcgggcggtggaattcttcatgccggtgggccagagcggcgagtcccagcaatggatc
accgcgagcatgcggctgctgtcgctggccgcgcgcggcggttttctcgagcgcgcgctg
gccgacatgcgcaaggtcgcctgggaccgcgggccggtgcgcctgggccaccacgtgaag
gccgacggcacccaggtgcccatgtggcacgactccgaagtgggcgccatcgcctatgcg
atccagcagctgatcgcgcgccgcagcggccaggtgcccgcggcgccggacgccgcggcg
ccaccgatggccggcctcacgccgatgcagggtgccaagtgccccgaatgcggcgcccac
gccatgatccgcaaggatggctgcgactactgcacgcagtgcggacacctcggaagctgc
ggatga

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