Variovorax paradoxus B4: VAPA_2c04650
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Entry
VAPA_2c04650 CDS
T02835
Name
(GenBank) putative efflux transporter, RND family
KO
K02005
HlyD family secretion protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
VAPA_2c04650
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Ortholog
Paralog
GFIT
Motif
Pfam:
YknX_C
BSH_CusB
Biotin_lipoyl
RND-MFP_C
BSH_YknX
BSH_RND
HH_EMRA
HH_MFP_RND
DUF6628
HH_YBHG
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
AGU53025
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Position
2:468653..469855
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AA seq
400 aa
AA seq
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MTSKKTLWISISAGVAVSAALLWAFAPRPLAVEVARASVGPYEQAVLEDGRTRLRDRYAL
SAPLTGRLARIALREGDAVEAGAVVATITPALSPMLDERTRREQSARAEAAEAAVRRADA
GVQRARVAVEQARTELRRNEQLAQQHFISPAKVDTDRLALEAARMELEAAVQSRQVAGHE
RDTARAALIAIRTPGSGEGSFALRSPVSGRVLRVAQTSEATVMLGAPLIDIGDTARLEIV
AELLTTDALQALPGAPVRIERWGGEGVLEGRVRRVEPAAFTKVSALGIEEQRVNVLIDLV
GPPDLWRALGDGYRVGVRIVTLSRSSVLRVPVSAVFPQPGGGMAVFVAKTGRAQLAPVEF
GGRNGSEAWVRGGIAEGAEVIVYPAATLRDGMRVKVRAVR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcgaaaaaaaccttgtggatatcgatctcggcgggtgtggccgtctcggccgcg
ctgctctgggccttcgcgccaaggccgctggccgtggaggtggcgcgcgccagcgtgggt
ccgtacgaacaggccgtgctcgaagacggccggacgcgcctgcgcgaccgctatgcgctg
agcgcaccgctgacgggccggctggcccgcatcgcgctgcgcgagggagacgcggtggaa
gccggtgccgtggtcgccaccatcacgccggcactctcgcccatgctcgacgaacgcacg
cggcgcgagcagtccgcccgcgccgaagccgccgaggcggcggtgcgcagggccgacgcc
ggcgtgcagcgcgcgcgggttgccgtggagcaggcgcgcaccgagcttcggcgcaacgag
cagctggcgcagcagcacttcatctcgccggccaaggtcgacaccgaccggctggcgctc
gaggccgcccggatggaactcgaagcggccgtgcagtcgcgccaggtggcggggcacgag
cgcgacaccgcgcgtgccgccttgatcgccatccgcacacccggctccggcgagggaagc
tttgcgctgcgttccccggtgagcggtcgcgtcctgcgcgtggcacagaccagcgaggcg
acggtgatgctcggcgcgccgctgatcgacatcggcgacaccgcgcggctggagatcgtg
gccgagctgctgaccaccgacgcgctgcaggcgctgcccggcgcgccggtgcgtatcgag
cgctggggcggcgagggcgtgctggagggacgtgtgcgccgcgtcgagcccgccgcgttc
accaaggtgtcggcgctgggcatcgaggagcagcgcgtgaacgtcctgatcgacctcgtc
gggccgcccgatctgtggcgggcgctgggcgacggctaccgggtgggggtgcgcatcgtg
acgctgtcgcgttcctcggtcctgcgggtgccggtgagcgcggtctttccgcagcccggc
ggcggcatggccgtgttcgtggcgaagacgggaagagcgcagcttgcgccggtcgagttc
ggtggacgcaacggcagcgaggcctgggtgcgcgggggaattgccgagggggccgaggtg
atcgtctatccggcggcgacgctgcgcgacggcatgcgcgtcaaggtgcgtgcggtgcgc
tga
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