Variovorax paradoxus B4: VAPA_2c05070
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Entry
VAPA_2c05070 CDS
T02835
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c05070
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_2c05070
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BamE
Pilus_CpaD
DUF3192
Motif
Other DBs
NCBI-ProteinID:
AGU53067
UniProt:
T1XJM4
LinkDB
All DBs
Position
2:complement(510423..511256)
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AA seq
277 aa
AA seq
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MTTQFHRFSAIAAGAAALLMLQGCSSYVSRGITDDGKATEVVFPNIDNDAWLKEGTFPNL
DNLRAVAPGVTKDQLYDLLGRPHFREGIASPREWDYIFHFRKAGGGVTTCQYKAIFDKDY
KAQTFHWLPAGCGDVLAARAVPAVERPAAASPVAPRRTTLGADGLFRFDGRSLADLLPEG
RRKLDALAGDIKATDTVKVTGHTDRLGSQAYNNALSLARANTVRDYLVQAGVPAQKIQVQ
GRGESEPKVQCAQTGRADLIDCLAPNRRVEIEVFAER
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcaattccatcgcttctcggccatcgcagcgggggccgcggcactgctgatg
ctgcagggctgcagctcctatgtgagccggggtatcaccgacgatggcaaggccacggaa
gtggtcttcccgaacatcgacaacgacgcgtggctcaaggaaggcaccttcccgaacctg
gacaacctgcgcgccgtggcgcccggcgtcacgaaggaccagctgtacgacctgctcggc
cggccgcatttcagggagggcatcgcgagcccgcgcgagtgggactacatcttccacttc
cgcaaggccggcggcggggtgaccacctgccagtacaaggcgatcttcgacaaggactac
aaggcacagaccttccattggctgccggccggctgcggcgacgtgctggcggctcgtgcg
gtgccggcggtcgaacgtccggccgccgcgagcccggtggcaccgcgccggaccacgctg
ggtgccgatggcctgttccgcttcgacggccggtcgctggccgacctgctgccggagggg
cgccgcaagctcgatgccctggccggcgacatcaaggcgacggataccgtcaaggtcacc
ggccataccgaccggctcggcagccaggcctacaacaacgcgctctcgctggcgcgcgcc
aacaccgtgcgcgactacctcgtgcaggccggcgtgccggcgcagaagatccaggtacaa
ggcaggggcgaatccgagccgaaggtgcaatgcgcgcagacggggcgcgcagacctgatc
gactgcctggcgccgaaccgccgcgtcgagatcgaggtgttcgccgaacgctga
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