Variovorax paradoxus B4: VAPA_2c06000
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Entry
VAPA_2c06000 CDS
T02835
Name
(GenBank) putative 2-oxoacid:acceptor oxidoreductase, alpha subunit
KO
K00174
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:
1.2.7.3
1.2.7.11
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00010
Glycolysis / Gluconeogenesis
vpd00020
Citrate cycle (TCA cycle)
vpd00620
Pyruvate metabolism
vpd00650
Butanoate metabolism
vpd00720
Other carbon fixation pathways
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VAPA_2c06000
00020 Citrate cycle (TCA cycle)
VAPA_2c06000
00620 Pyruvate metabolism
VAPA_2c06000
00650 Butanoate metabolism
VAPA_2c06000
09102 Energy metabolism
00720 Other carbon fixation pathways
VAPA_2c06000
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
VAPA_2c06000
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
VAPA_2c06000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
WH_Egal
Motif
Other DBs
NCBI-ProteinID:
AGU53159
UniProt:
T1XLJ9
LinkDB
All DBs
Position
2:613673..615532
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AA seq
619 aa
AA seq
DB search
MTSAGAIPQIEAVNDFVIKFANVNGSGSASANELFAKAILRMGVPVSPRNIFPSNIQGLP
TWYEVRVTEEGHLGRRGGTDMMVAMNPQTWDADLAELEPGGYLFYDSTRPLPPSKFRSDV
RVIGMPLTEICNAVYQDPRQRQLFKNIVYVGALAILLGIEPEVVEKLFGEQYKGKEKLLA
SNVQALHLGCDFARENLEPLGLRVQRADRVGHRIFVDGNSAAALGCVYGGATVAAWYPIT
PSSSVAEAFQKYCTKFRVDPATGQQRFAIVQAEDELASIGVVVGAGWNGARAFTATSGPG
ISLMTEFIGLAYFAEIPVTIINVQRGGPSTGMPTRTQQADILSCAYASHGDTKHVLLFPE
DPHECFEHAAAALDLADRLQTPVFLMTDLDIGMNQRLCAPFAWDDSKAYDRGKVMSAEEL
EAGRDFGRYKDVDGDGIPWRTLPGTHPTKGSYFTRGTTRDAYARYSERGPDYIYNMERLL
KKFATAATLVPQPVLRPAAEKTELGVIYFGSTSPAMHEALQALEARGIHLDALRLRAFPF
PDSVVQFLAQHSQVFVVEQNRDAQMRNLLVNELDIDPARLVRVLHFDGTPITARFIVQAI
GTHVEKTQASGAAGTKESA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagcgcgggggccatcccgcagatcgaagcggtcaacgatttcgtcatcaagttc
gccaacgtcaacggctcgggttcggcctccgccaacgagctgttcgccaaggccatcctg
cgcatgggcgtgccggtgagtccgcgcaacatctttcccagcaatatccagggcctgccg
acctggtacgaggtgcgcgtgaccgaagagggccacctggggcggcgcggcggcaccgac
atgatggtggcgatgaacccgcagacctgggacgccgacctggccgagctggagcccggc
ggctatctcttctacgacagcacgcggccgctgccgccgtcgaagttccgcagcgacgtc
cgcgtgatcggcatgccgctgaccgaaatctgcaacgccgtctatcaggacccgcgccag
cgccagctgttcaagaacatcgtctatgtgggggcgctggccatcctgctgggcatcgag
ccggaagtggtcgagaagctgttcggcgagcagtacaagggcaaggaaaagctgctggcc
tccaacgtgcaggcgctgcacctgggctgcgacttcgcgcgggagaacctcgagcccctg
gggctgcgggttcagcgcgccgatcgtgtgggccatcgcatcttcgtggacggcaacagc
gccgcggcgctgggctgcgtgtatggcggcgccacggtcgcggcctggtatccgatcacg
ccgtcgtcctcggtggccgaggccttccagaagtactgcaccaaattccgcgtggacccg
gccaccggccagcagcgctttgccatcgtgcaggcggaagacgagctcgcctcgatcggc
gtggtggtcggcgccggctggaacggcgcacgggccttcacggcgacctcgggaccgggc
atttcgctgatgaccgagttcatcggcctggcctactttgccgagatcccggtcacgatc
atcaacgtgcagcgcggtggcccttccaccggcatgccgacgcgcacgcagcaggccgac
atcctgtcctgcgcctacgcctcgcacggcgacaccaagcacgtgctgctgtttcccgag
gacccgcacgagtgcttcgagcacgcggcggcggcgctggacctggccgaccggctgcag
acgccggtgttcctgatgacggacctggacatcggcatgaaccagcgcctgtgcgcgccc
ttcgcctgggacgacagcaaggcctacgaccgcggcaaggttatgagcgccgaagagctc
gaggccggccgcgacttcggccgctacaaggacgtggacggcgacggcattccctggcgc
acgctgccgggcacgcacccgaccaagggcagctacttcacccgcggcacgacgcgcgac
gcctacgcccggtattcggagcgcgggccggactacatctacaacatggagcggctgctg
aagaagttcgcgaccgcggccacgttggtgccgcagccggtgctgcgtccggccgccgag
aagaccgagttgggcgtgatctatttcggttcgaccagcccggccatgcacgaggcgctg
caggcactggaagcacgcggcatccacctcgatgcgctgcggctgcgcgcctttcccttc
ccggacagcgtggtgcagttcctggcgcagcacagtcaggtgttcgtggtcgagcagaat
cgcgacgcccagatgcgcaacctgctggtcaacgagctggacatcgatcccgcccggctg
gtgcgggtgctgcatttcgacggcacgcccatcacggcgcgcttcatcgtccaggccatc
ggcacgcatgtggagaagacgcaagcctccggcgccgccggcacgaaggaatctgcatga
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