Variovorax paradoxus B4: VAPA_2c06200
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Entry
VAPA_2c06200 CDS
T02835
Name
(GenBank) hypothetical protein
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4781
Motif
Other DBs
NCBI-ProteinID:
AGU53179
UniProt:
T1XLL8
LinkDB
All DBs
Position
2:complement(636567..646256)
Genome browser
AA seq
3229 aa
AA seq
DB search
MDALAAARAAEELRRQAEAAAKRAAEEARRQAEEARKQAEAARRKAEEARKAAEAAEAKA
EKSKAEADQQEATKARSASDAAERDALKQEAASNLKDKQSTLADAKLDEIRQRRADNNPS
EATRAAQGKVDAAQKMNVIFEPPANQPKGQAPATSPGTQALLEKAQTAAKPVFKAQANGG
DGTREQKTAVDTAMTDWLQAAEQDMRKASLRAIAEGKDPNDAIDKVTADAHAALDKGGVF
DPKSIGKYIDKARDGVRADSPEVRQLRGEQYDAGQAGKAQVADARSRAQDADAAATKAEK
YAAGFSTDGGRNDTLVTAKQNAQAEAERLRAVANRAKSELQSAENAFGTTDPSDPQNPKT
NTLGTVDADYNARVADAEVKEFSFKYDQAVAGGDAKEIQKADAALRDAQQGQRYMHALSD
DLDAKLGASDAENAKTDAEGAWNAASLQRPARVTVTEHDGDKTTTRNIDPDGYDPAFWAK
PGSEEGKKVRNIDGKYFYVDGDKKTELDPLTAALYAANDKRDAAKARSDQTTTTLNAVKD
DLFGGADGSRAKLDATGYLDRADKINQGLTDANSAVANAKPQDLGRALEQQRAAQADANA
LKAMQDLRAAERDQAAGKTVDGGKLEDLRVAAREAQRQADAAQPKLSGDDEKKMRETQLP
AAQEAYDKKAAEVKTLTAPGSKATEAEQQKALDELDALDLAKRDIETQLGQIDAERAWYA
ARYQYDRTSFAKPQLTMFMNGDKSTTGDVYPKNYDPTWNIKRGEDGKVSAEGLPRGLSPD
DIEVRADGKGGYDVTIKKDSKVFGWQKSDQGQMVDFSVRAGTYKMNPATAARWKTSEFGD
GGLAKARSARADVEKRLAQAAADAPPQPGAQPAPGPDGKPAPTLNFGDDLAPRKKTVDQN
LTDAIKARDKAQDAYDAGTGDRTALGNDLDDAKARVTIAQNEQAAVDAAITWQEANHARQ
RIEADKRAGRAQMCYATSPQQTADDARDRADAARKDWLSSVNKFHADAAARDLAAAKSAH
EKWKSANPGLAETGSDTWKKLQAAQTQSDTAVRYQAAGARDNAYAQQQSFTIQNLPFSQR
DDKRALYRLFEQNPQVMAQAIMNDQFVQYGGGPIAMKGRTQIENEIGLALGWNPDRSLDA
ATPADSERLRQNQRLFGNLGDAQKDLLSKMVDKVVEVGGEHARVTVLPVVYALDSDDGGI
IKTAIFKVESKDKPGETQLVDEQAWTYKDLTDYRANNSLPVEGVKLVTPEDASYSLDANG
NVKLFAGDARTETGWQTFRREKHLDMVVAGVGLVAGVALTVGSFGTLAAPGVMLAAGALT
VLAAGYGVATSVEDLNKLSTHGQSINPANSEQARMDWLNLGLSTVSVPVVGASTRATMAA
LRAGRAAKAATAAEAAGDAVTAQARAADFARYAQTAQAWGKPAAMASKPLGLGSAYATGE
GVHSLVKNWDQMTPAEREQQIMMLGVNAAGFASPIFAKGYVRVHNAIKPPPANTARPADA
TTTPDALTPFREAPRMSVAWPSTPRAVPADVAGPAALPSIVTDVSFNPVMTSVRRAGDTA
DAPGTARAPTGARSPQEKRTSPGSNIAEDAPRANAPFVRSAQRIELEHNAGTKDLVSVKS
TPASPAKGDEGSFAVYRPAQDPELGGPTSYPLPATRRLGTTNWSDSLLTVFAAGGEAEGV
RYYLYPRTHDDSGIILAAHRDGLPAGTDSPSAAQRASDHARGEASGDFSSVLPTHYATLD
EALAAVQPQGWVSLGDEIAIVDAASIAPDGSVPPEAVLATVKVDPAQGGPAKATQITAHP
DRPALRIAYPEGYAPGQPLIYTSASGRRVDLLNTQSGRSEMGINAFRRRVADLEIFAPGE
RTVRRSDGQPASEAVPIPEGYFAVNGHGLEGMMNDANGNPLTAEGLARAIVAHENYRGQP
VLMLSCLSGDGAVPLAQRLATLLGHDVYAATESVVMTNRDQNAPGSVYTRSISLSDEGSS
YNAGALKAEPMQSLPIVGIRENGRTVYDDIPVQGPPVYARFRPGLPIEPAAAQPVAPRAA
SAVPEPPRAARPIAPERPRTAGAGRGDTDTPSVKTGGLPWGPVATGVDAHGTPLAPTTLG
TGRSWLQVALRGDRLVAFHQRASEPGSGLRPLQPSPDEAAVTTRITEDPAAGSNVRFAVH
PMAPGEIMYGGTGVRAKRNNTFGTFAEASAAAQQRGGAWVYRIHPDGSMAPLTKRGRAAP
EEIMGSVHVGADGQPMPIGIPNVHSAAWREGASAPAAPSTAAANHQAGESTGLAMLEPDM
DALLEGPSDYTKPRPAYAGPATLRELQTSKAAATPEDIEQTLYLASAGSPDGHAARDIPL
RTRFMQWARGQAPSFIGAPDFIGGRYVLAKDAASLNQGAPDATFALLDRSHVYSSFETAR
AAAAAQANTEGSGLVGVVRLIGPKTEMAQVAATGRFTQAQFDGIVGVRPDGAVHPVSISN
RQAAHAPKPGEVFVDPHKTMETNDQVMSPAQKRRIFAKSVGYMIGTGAAFYGAVRLGGGA
LGLNMTNPALGVAGASLGGYVGARAVFLRYAYEAFFYRGSIAGLKQGGKIRLQKYLNPKD
QDTFALIGNIADPAKREASLFQLKSQLDSWHAARRGIQGRSDYGEALKVLARNPDDATAL
DTLYKGAIERSARPVIGKRGLFNRIPPALRNDYAQALKAFNANPRDAEAAALLMTAPEVG
RGTQHAGAVRGRLLRNVPGADRARYRDAVQTLASKNGDVNAALRTLEDIPLDTVARQTTG
ARGAFRGIPKADRQTIAMAAETLRVNPSDARSRAVLDQSPGKLTSPNSPVGRTLFGARVL
SFGLSHSAGTRLYLNPFFDAPSHQWTWDITTLDGVRQWISNEGSLHYAVGNATGLGASVA
NRYASIAQARSGHVMSERGSTDAPAPEAGQAPPPKATTPPLDKNGNPLPVYKATNGYSWF
RRVLIGLGNPKAVTHDGVAPDGGPMVKRTFTQRLAQFSSWGDSSGTIGLTISDSIQAYMY
IRGGQWDLATPQLLKVASDVGIFRGTQKDYLDEYRSNRQMGPMVYHSRLTNYFNAPLGEA
RTSPTETSHGWIRRGAPPLVLLGVAVAARVAAEEWSMHEKNKKPQQNQPAPAPTPTPTPT
QTPTPLPTPSATTTPVPGPSPTPTFTPTPIPRSTATPNPTPNPKPTPPQHGGVRFIVDTM
QPSAVELQAMLDAGHAQDPQQPVNPALSDFLNVDPGHAQRTKAAEVLLA
NT seq
9690 nt
NT seq
+upstream
nt +downstream
nt
atggatgccttggcggccgccagggctgccgaagagctgcggcgccaggcggaagccgcg
gcgaagcgggcggccgaagaggcgcggcggcaggccgaggaagcacgcaagcaggccgaa
gcggcgcgccgcaaagcggaggaagcgcgcaaggccgctgaagccgccgaggccaaggcc
gagaaaagcaaggccgaagccgatcagcaggaagccaccaaggcgcgcagcgccagcgac
gcggccgagcgcgatgcgctcaagcaggaagcggcaagcaacctcaaggacaagcagtcc
acactcgcggacgcgaagctcgacgagatccggcagcgccgtgcggacaacaacccctcg
gaggccacgcgcgccgcgcagggcaaggtcgacgcggcgcagaagatgaatgtcatcttc
gagccgccggccaaccagcccaagggccaggcccctgcgaccagcccgggcacccaagcc
ctgctcgagaaggcgcagaccgccgccaagccggtgttcaaggcgcaggcgaacggcggc
gacggcaccagggaacagaagaccgcggtcgacaccgccatgacagactggctgcaggcc
gccgagcaggacatgcgcaaggccagcctcagggcgatcgccgaaggcaaggacccgaac
gacgccatcgacaaggtgacggccgacgctcacgccgcgctcgacaagggcggcgtgttc
gacccgaagagcatcggcaaatacatcgacaaggcgcgcgacggcgtgcgcgcggactcg
cccgaagtgcgccagttgcgcggcgaacagtacgacgccggtcaggccggtaaggcgcaa
gtggccgacgcgcgcagccgcgcccaggacgccgatgcggccgccaccaaggccgaaaaa
tacgccgcaggtttcagcaccgacggtggccgcaacgacacgctcgtcaccgcgaagcag
aacgcccaggccgaggccgagcgcctgcgcgccgtggccaaccgcgccaagtccgaactc
cagagcgccgagaatgccttcggcaccaccgatccgtcggacccgcagaacccgaagacc
aacaccctcggcacggtcgatgccgactacaacgcgcgcgtcgccgacgcagaggtcaag
gagttcagcttcaagtacgaccaggcggtggccggcggcgatgccaaggagatccagaag
gccgacgcggccttgcgcgatgcgcagcagggccagcgctacatgcacgcgctgagcgac
gacctcgacgctaagctcggggccagcgacgccgagaacgcaaagaccgacgccgaaggc
gcatggaatgcggcatcgctgcagcgccccgcccgcgtcacggtgaccgagcacgacggc
gacaagaccacgacgcggaacatcgatcccgacggctacgatcccgcgttctgggccaag
cccggcagcgaggaaggcaagaaggtccgcaacatcgacggcaaatacttctacgtcgac
ggcgacaagaagaccgaactcgatccgctgaccgccgcgctgtacgccgcgaacgacaag
cgcgatgccgccaaggcccgcagcgaccagaccacgaccacgctgaacgcggtcaaggac
gacctcttcggcggcgccgacggtagccgcgccaagctcgacgcgaccggctatctcgat
cgcgcggacaagatcaaccaggggctgaccgacgccaacagcgccgtcgccaacgccaag
cctcaggacctgggccgggcgctcgagcagcagcgcgccgcgcaggctgacgccaatgcg
ctgaaggccatgcaggacctgcgtgcggccgaacgcgaccaggccgcgggcaagaccgtg
gacggcggcaagctcgaggacctgcgcgtcgcggcgcgcgaggcccagcgccaggccgac
gccgcgcagccgaagctctcgggcgacgacgagaagaagatgcgcgagacgcagctgccc
gcggcgcaggaggcctacgacaagaaggccgcggaagtgaagacgctcaccgcgcccggc
agcaaggccaccgaggccgagcagcagaaggcgctcgacgaactcgacgcgctggacctc
gccaagcgcgacatcgagacccagctcggtcagatcgatgccgaacgcgcctggtatgcc
gcgcgctaccagtacgaccgcacgagcttcgccaagccgcagctgacgatgttcatgaac
ggcgacaagtcgacgaccggcgacgtctacccgaagaactacgacccgacctggaacatc
aagcgcggcgaggacggcaaggtcagtgccgagggcctgccgcgcggcctctcgcccgac
gacatcgaagtgcgcgcggacggcaagggaggctacgacgtcacgatcaagaaggactcg
aaggtcttcggctggcagaagtccgaccagggccagatggtcgacttctcggtgcgcgcc
ggcacctacaagatgaacccggccacggccgcgcggtggaagacctccgagttcggcgac
ggcggcctcgccaaggcgcgcagcgcccgcgccgacgtcgagaagcgcctggcgcaggcc
gcggccgacgcgccgccgcagcccggcgcgcagccggcgcccgggcccgacggcaagccc
gcgcccacgctgaacttcggcgacgacctcgcgccgcgcaagaagacggtggaccagaac
ctcacggacgcgatcaaggcgcgcgacaaggcgcaggacgcctacgacgcaggcaccggc
gaccgcaccgcgctgggcaatgacctcgacgacgccaaggcgcgcgtcaccatcgcccag
aacgaacaggccgcggtcgacgccgcgatcacctggcaagaggccaaccacgcgcgccag
cgcatcgaagccgacaagcgcgcgggccgcgcgcagatgtgctacgccacctcgccgcag
cagaccgccgacgatgcacgcgacagggccgacgccgcccgaaaggactggctcagctcg
gtcaacaagttccacgccgacgccgcggcgcgcgatctcgccgccgcgaagtctgcgcac
gagaaatggaagagcgccaaccccggcctggccgagaccggcagcgacacctggaagaag
ctgcaggcggcgcagacccagtcggacacggccgtgcgctaccaggccgccggcgcacgc
gacaacgcctacgcgcagcagcagagcttcaccatccagaacctgccgttcagccagcgc
gacgacaagcgcgcactctatcggctgttcgagcagaaccctcaggtgatggcgcaggcc
atcatgaacgaccagttcgtgcagtacggcggcggcccgatcgccatgaagggccgcacg
cagatcgagaacgagatcggcctggcgctcggctggaaccccgaccgctcgctcgatgcc
gcgacgccggccgacagcgagcgcctccggcagaaccagcgcctctttggcaacctcggc
gacgcgcagaaggacctgctctcgaagatggtcgacaaggtggtggaagtcggcggcgag
cacgcgcgcgtgaccgtgctgcccgtcgtctacgcgctcgacagcgacgacggcggcatc
atcaagacggcgatcttcaaggtggagagcaaggacaagcccggcgagacccagctcgtc
gacgaacaggcctggacctacaaggacctcacggactaccgcgccaacaacagcctgccg
gtcgagggcgtgaagctcgtcacgcccgaggacgccagctactcgctcgacgccaacggc
aacgtcaagctcttcgccggcgacgcgcgcaccgagaccgggtggcagaccttccggcgc
gagaaacacctggacatggtggtcgccggcgtcggcctggtggctggcgtggcgctgacg
gtcggctccttcggcacgctcgcggcgcctggcgtcatgctggctgccggcgcgctcacc
gtgctcgcggcgggctacggcgtcgcgacctcggtcgaggacctgaacaagctcagcacg
cacggccagagcatcaatccggcgaacagcgagcaggcgcgcatggattggctgaacctc
ggtctctcgacggtcagcgtgccggtggtgggcgcctccacgcgcgccaccatggccgcg
ctgcgcgcgggccgggccgccaaggcggccacggccgcggaagccgccggcgacgccgtg
acggcacaggcacgcgcggccgacttcgcgcgctacgcgcagaccgcccaggcctggggc
aagcccgcggcgatggcctccaagccgctcggcctcggcagtgcttacgccaccggagaa
ggcgtgcactcgctggtgaagaactgggaccagatgaccccggccgagcgcgagcagcag
atcatgatgctcggcgtcaacgccgcgggctttgcctcgccgatcttcgccaagggctac
gtgcgcgtgcacaacgcgatcaagccgccgcccgcgaacaccgcgcggccggcggacgca
acgacgacgcccgacgcgctcacgccgttccgcgaagcgccacgcatgagcgtcgcgtgg
ccgtcgacgccgcgtgcggtgcccgccgacgtggccggtccggcggcgctgccgtccatc
gtgaccgatgtctcgttcaacccggtcatgacctcggtgcggcgcgcgggcgataccgcc
gatgccccggggaccgcgcgcgcaccgacgggcgcacgcagtccccaggaaaaacgcacg
agcccgggctcgaacattgcggaagacgcaccgcgcgccaatgcccccttcgtgcgctcg
gcgcaacgcatcgagctggagcacaacgcaggcacaaaggatctggtgagcgtgaagtcc
acgccggcatcgcccgccaagggtgatgagggcagcttcgccgtctacaggccggcgcag
gaccccgagctcggcgggcccacgagctatccgctgccggcgacccgccgtctcggcacc
acgaactggtcggattcgctgctgaccgtgttcgctgccggcggcgaagccgagggcgtg
cgctactacctctatccgcgcacccatgacgacagcggcatcatcctcgccgctcaccgc
gacggcttgcctgccggcacggacagcccgagtgccgcgcagcgcgccagcgaccatgca
aggggcgaagccagcggcgacttctccagtgtcctgcccactcactacgccaccctcgac
gaagcgctcgcggcggtgcagccccagggctgggtctcgctgggcgacgagatcgcgatc
gtggacgcggcaagcatcgcgccggacggcagcgtcccgcccgaagccgtgctggccacc
gtgaaagtcgaccccgcacaaggcggccccgcgaaggccacgcagatcaccgcccatccg
gacaggcccgccctgcgcatcgcctatcccgagggctatgcgccgggccagccgctgatc
tacaccagtgccagcggccggcgcgtcgacctgctcaacacgcagtccggccgaagcgag
atggggatcaacgccttccgccgccgcgtggccgacctcgagatcttcgcgccgggcgag
cgcacggtgcgccgcagcgacggccagcccgcgagcgaggcggtccccattcccgagggc
tatttcgcggtcaacggccacgggctcgaaggcatgatgaacgacgcaaacggcaatccg
ctcacggccgaggggctggcgcgagccatcgtcgcgcacgagaactatcgcggccagccg
gtactgatgctgtcgtgcctcagcggagacggcgcggtgccgctggcgcagcgcctggcc
acgctgctcggccacgacgtgtacgcggcaaccgagtcggtcgtgatgaccaaccgcgac
cagaacgcgccgggctccgtctacacccggagcatctccctgagcgacgaaggcagctcc
tacaacgcaggcgcgctcaaggccgagccgatgcagtcgctgcccatcgtcggaatccgc
gagaacgggcgcaccgtctacgacgacatcccggtgcagggcccgccggtctacgcgcgc
tttcgcccgggcctgccgatcgagccggccgctgcgcaacccgtggcgccgcgcgccgca
tccgccgtgccggagccgccgcgcgcggcacgaccgatcgctcccgagcggccccgcacg
gccggcgccggccgcggcgacaccgacacgccctccgtcaagacgggtggcctgccatgg
ggccccgtcgccaccggcgtggatgcgcatggcacgcccctggcgccgaccacgctcggc
accggacgcagctggttgcaggtcgcgctgcgcggcgacaggctcgttgcgttccaccag
cgcgcgagcgagcccggatctgggctgcgcccgttgcaaccctcgcccgatgaagccgcg
gtgacgacccgcatcaccgaggaccccgccgcgggttcgaacgtgcgcttcgcggtccat
ccgatggcgccgggcgagatcatgtatggcggcaccggcgtgcgcgccaagcgcaacaac
accttcgggaccttcgcggaggcctccgccgcggcgcagcagagaggcggcgcctgggtg
taccgcatccatcccgacggcagcatggcgccgctgacgaagcgcggccgcgcggcgccc
gaggagatcatgggttcggtgcacgtcggcgcggacggacagccgatgcccatcggcatt
ccgaacgtgcattcggccgcatggcgcgagggtgcgtccgcaccggcggcaccgagcacg
gccgccgccaaccaccaggccggcgaatccacggggctcgcgatgctcgaacccgacatg
gacgcactgctcgaagggccgagcgactacaccaagccacgccccgcctatgccggcccg
gcaacgctgcgcgaactccagacaagcaaagccgcggccactcccgaggacatcgagcag
acgctctacctcgcaagcgccggctcgccggacggccatgccgcgcgcgacattccgctg
cgcacgcgcttcatgcaatgggcacgcggccaggcgccttcgttcatcggcgcaccagac
ttcatcggcgggcgctacgtccttgcgaaggacgcggccagcctcaaccagggcgcgccc
gatgccaccttcgcgctgctcgaccgctcgcatgtgtactccagcttcgagactgcgcgc
gcggcggcggccgcgcaggcgaacaccgaaggcagcggcctcgtgggcgtggtgcggctg
atcggcccgaagaccgagatggcgcaggtcgcggccaccggacgcttcacccaggcgcag
ttcgacggcatcgtcggcgtgcgccccgacggcgcagtacacccggtcagcatcagcaac
cggcaggctgcgcatgcgccgaagcccggcgaggtcttcgtcgatccgcacaagacgatg
gagacgaacgaccaggtgatgtcgccggcgcagaagagacggatcttcgccaagtcggtc
ggctacatgatcggcaccggcgcggccttctacggtgcggtccgcctcgggggcggggca
ctgggcctgaacatgaccaacccggcgctcggcgtcgccggcgcgtcactgggcggctac
gtcggtgcgcgcgccgtgttccttcgctacgcctacgaagccttcttctaccgcggcagc
atcgcgggcctgaagcagggcggcaagatccggctgcagaagtacctcaaccccaaggac
caggacaccttcgcgctgatcggcaacatcgccgacccggccaagcgcgaggcctcgctg
ttccagctcaagagccagctcgacagctggcacgcggcgcggcgcggcatccagggccgc
agcgactatggcgaagcgctgaaggtgctggcgaggaaccccgacgacgccacagctctc
gacacgctctacaagggcgccatcgaacgcagcgcgcgcccggtgatcggcaagcgcggc
ctgttcaaccgcattccgcccgcgcttcgcaacgactacgcccaggcgctgaaggccttc
aacgccaacccccgcgacgccgaagccgcggcgctgctgatgaccgcccctgaagtggga
cgcggcacccagcatgcgggcgccgtgcgcgggcgcctgctgcgcaacgtgccgggcgcg
gaccgcgcacgctaccgcgacgcggttcagaccttggcgagcaagaacggcgacgtcaac
gccgcgctcaggacgctggaggacattccgctcgacacggtcgcgcgccagaccacggga
gcccgcggcgcattccgcggcattccgaaggccgaccgccagaccatcgcgatggcggcg
gaaacactgcgcgtcaacccgtcggacgcacgctcgcgcgcggtgctggaccagagcccc
ggcaagctcacgtcgccgaactcgccggtgggccgcacgctgttcggggcgcgcgtgctg
agcttcgggctgagccactcggcaggcacgcggctgtacctgaaccccttcttcgacgcg
ccgagccaccagtggacctgggacatcaccacgctcgacggcgtgcgccagtggatcagc
aacgaaggcagcctgcactatgccgtgggcaacgccaccggcctcggcgccagcgtggcg
aaccgctatgcctcgatcgcgcaggcacgcagcgggcatgtcatgagcgagcgcggatcg
accgatgcccccgcgcccgaggccggccaggcgccgccgcccaaggccaccacgccgccg
ctcgacaagaacggcaatccgctgccggtctacaaggccaccaacggctactcgtggttc
aggcgcgtcctcatcggcctgggcaacccgaaggccgtcacgcacgacggcgtcgcacct
gacggcggcccgatggtcaagcgcaccttcacgcagcgcctggcgcagttctcgtcgtgg
ggcgactccagcggaacgatcgggctgacgatctccgacagcatccaggcctacatgtac
atccgcggcggccaatgggatctcgcgacaccgcagctgctgaaggtggcgagcgacgtg
ggcatcttccgcggcacgcagaaggactatctggacgagtaccgctcgaaccggcagatg
ggcccgatggtctaccactcgcgcctgaccaactacttcaatgccccgctcggcgaggcc
aggacgagcccgaccgagacctcgcacggctggatccgccgcggcgcgccgccgctggtg
ctgctgggcgtggccgtcgccgcacgggtggccgccgaggaatggtcgatgcacgagaag
aacaagaagccgcagcagaaccagccggctcctgcccccacaccgacccccacgccgacg
cagacaccgacacctttgcccaccccttcggcgacgaccacgccggtgccgggcccgtcc
cctaccccgacgttcactccgacaccaatacccaggtcgacggcaacacccaacccgaca
ccgaacccgaagccaacgcctcctcagcatggtggcgtgcgcttcatcgtcgatacgatg
caaccctcggccgtcgagctccaggcgatgctcgatgcgggccatgcgcaagacccgcag
cagcccgtcaacccggcgctgtctgacttcctcaacgtcgacccgggccacgcccagcgc
acgaaagccgcggaggtacttctcgcctga
DBGET
integrated database retrieval system
