KEGG   Variovorax paradoxus B4: VAPA_2c06220
Entry
VAPA_2c06220      CDS       T02835                                 
Name
(GenBank) putative type III secretion apparatus protein, YscQ/HrcQ family
  KO
K03225  type III secretion protein Q
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_2c06220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_2c06220
Secretion system [BR:vpd02044]
 Type III secretion system
  Type III secretion core apparatus
   VAPA_2c06220
SSDB
Motif
Pfam: FliMN_C FliMN_C_rel DUF4350
Other DBs
NCBI-ProteinID: AGU53181
UniProt: T1XKX1
LinkDB
Position
2:complement(647198..648313)
AA seq 371 aa
MPAAGADAVTELGEARALPRADAANVRALNRLYGAAPLPDMTAARGVRYRIRWHHDTAFA
RTARESFRFRLGAHVGHLAMDAPSLQTLLGERRIDLLPRDLRYILLADALHPLIDALEKA
LRLHFEWQPSEAQARESHERGLQAALLQCDPERAAFFVAIPLEGSAVLRGFVQFEDAATL
DALVPAGPASRHNAHADHAFDALRLPVSFRLGSTPIRLGEVGSIRPGDIIGIEQWSSSGA
AIVVAAELGGPAGRHLSAFAEGSRITVQQSRDSAMKPDIPALATDTADNANLPIDRLDAL
EVTLRFEVGDLCVSLGELKNIRAGHVFDLSQPLNRSPVRILAHGNVLGKGYLVAVGDRLG
VRVSEFAPGEV
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgcccgccgcaggcgctgatgcagtgacggaactcggcgaagcacgcgcattgccgcgt
gccgatgccgcgaacgtgcgcgcgctcaatcgcctgtatggtgcggcgccgctgcccgac
atgacggctgcgcgcggcgtgcgctaccgcatccgctggcaccacgacacggctttcgcg
cgcacggcgcgagaaagtttccgcttcaggctcggtgcacatgtcggccatctcgcgatg
gacgcgccgagccttcagacgctgctgggcgagcgccgcatcgacctgctgccgcgcgac
ctgcgctacatcctgctcgccgatgcgctgcatccgctgatcgacgcactcgagaaggca
ctgcgtcttcatttcgaatggcaaccctccgaagcgcaagcgcgcgagtcccacgaacgc
ggcctgcaggcagcgctgctgcagtgcgatcccgaacgcgccgccttcttcgttgccatt
cccctggaaggcagcgccgtgctgcgcggcttcgtgcagttcgaggatgccgccacgctg
gacgcgctggtgccggcgggccccgcttcacggcacaacgcgcacgcggaccatgcgttc
gacgcgctgcgcctgcccgtgagctttcgcctcggcagcacgccgatccgtctgggcgag
gtcggcagcatccgtcccggcgacatcatcggcatcgagcaatggagttcctcgggagcc
gccatcgtggtcgcggccgagctgggaggccccgcggggcgacatctttccgccttcgcc
gaaggctcgcgcatcaccgttcagcaatcgagagacagtgccatgaagccagacataccc
gccctcgcgaccgataccgcggacaacgccaacctgccgatcgaccgtctcgatgcgctg
gaggtcacgctgcgcttcgaggtcggcgacctctgcgtgtcgctcggcgaattgaagaac
atccgcgccgggcatgtcttcgacctgagccaaccactcaaccgcagcccggtgcgcatc
cttgcgcatggcaacgtgttgggcaagggctatctcgtcgcggtgggcgaccgtctgggc
gtgcgcgtgtcggagttcgcgccgggcgaagtctga

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