Variovorax paradoxus B4: VAPA_2c06540
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Entry
VAPA_2c06540 CDS
T02835
Symbol
dctB
Name
(GenBank) putative TRAP dicarboxylate transporter sensor protein DctB
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAPA_2c06540 (dctB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vpd01001
]
VAPA_2c06540 (dctB)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vpd02022
]
VAPA_2c06540 (dctB)
Enzymes [BR:
vpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
VAPA_2c06540 (dctB)
Protein kinases [BR:
vpd01001
]
Histidine kinases
NtrC family
VAPA_2c06540 (dctB)
Two-component system [BR:
vpd02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
VAPA_2c06540 (dctB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HisKA
dCache_1
HATPase_c_2
HATPase_c_5
Form-deh_trans
Motif
Other DBs
NCBI-ProteinID:
AGU53212
UniProt:
T1XK16
LinkDB
All DBs
Position
2:complement(673769..675667)
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AA seq
632 aa
AA seq
DB search
MDARHRAATDAAFTALCNNGFMISREPARRFDLPSHSPRRWRGLPRWCGALAMVAAAAFA
GHHFAMQNGLARLREAADHRLDMLATGLDADLARFEYLPALMEMTPIVPALLGTPSDGSL
RDAVNRYLDGVNAAAGAEMLYVLDAGGTSLAASDWNRPGTTVGQDLSFRPYVIDALGQGR
GRFYGVGITSRKPGYYLSYALRRDQPTRGVVAVKVNLEETERAWRKLPGDVALIDQRGVV
ILATREDLKFRPMLPLDALQRAEVQRSRPYGEAGLQPLQWTLKEVLARDVKVIALDGVDQ
LASTRSLRGAPWQLMALDDLAPVRVGARYAAITASLAMAVLLLIAVTLWQRRRAVRQKLA
NQAALQAAHDTLESTVVARTAQLRAAQGELVHAGKMAALGQMSAGVVHELNQPLTAMRTL
SESAAILLDKNRFDDVRGNLQRIRGMVDRLARLTSQLKTFAHKSELPLAAVPMARAVADA
QAIVAEATKKNGVAIEVDVQPAALSVMAEEAALGSVLVNLMRNAIDAMQASPRRTLRLEV
RPQEGRVILRVSDTGPGIPPDILPRLFEPFVTSKPAGTGLGLGLAISAQLVRAMDGTLRA
ANLPEGGASFVVDLPAAVQAILISTPTGVINK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacgccaccgggcagccactgatgcggcgttcacggccttgtgcaataacggg
ttcatgatttcacgggagccggcccggcgcttcgacttgccttcccacagccccaggcga
tggcgcggcttgccgcgctggtgcggcgcactggcgatggtggccgcggccgccttcgcc
ggccatcacttcgccatgcagaacggcctcgcgcggctgcgcgaggcggccgaccaccgg
ctcgacatgctcgccacggggctcgatgccgacctggcccgtttcgagtatctgcccgcg
ctgatggaaatgacgcccatcgtccccgcgctgctcggcacgccctcggacgggtcgctg
cgcgacgcggtcaaccgctacctcgacggcgtcaacgccgccgcgggcgcagagatgctc
tatgtgctggacgccggcggcacctcgctggcggcttccgactggaaccgtcccggcacc
accgtcggccaggacctgtcgttccggccctacgtgatcgatgcgctggggcagggcagg
ggccgcttctacggcgtcggcatcaccagccgcaagcccggctactacctctcgtacgcc
ttgcgccgcgaccagcccacgcgcggcgtggtggccgtcaaggtcaacctggaggagacc
gaacgcgcctggcgcaagctgccgggcgacgtggcgctgatcgaccagcgcggggtggtg
atcctcgccacccgcgaagacctcaagttccggccgatgctgccgctcgacgccttgcag
cgggccgaggtgcagcgctcgcgcccctacggcgaagccggcctgcaaccgctgcaatgg
actctgaaggaggtgctggcgcgcgatgtgaaggtcatcgcgctcgacggcgtcgaccag
ctggcctcgacgcgttcgctgcgcggtgcgccgtggcagttgatggcgctcgacgacctg
gcgccggtgcgcgtgggcgcgcgctatgccgccatcaccgcgagcctcgcgatggcggtt
ctgctgctgatcgccgtcacgctgtggcaacgccgccgcgccgtgcggcagaagctggcc
aaccaggctgcgctgcaggctgcgcacgacacgctcgagtccaccgtggtggcgcgcacc
gcgcagctgcgcgccgcccagggcgaactggtgcatgccggcaagatggcggcactgggc
cagatgtcggccggcgtggtgcacgaactgaaccagccgctcaccgcgatgcgcacgctc
tcggagagcgccgccatcctgctcgacaagaaccgcttcgacgacgtgcgcggcaacctg
cagcgcatccggggcatggtcgaccgcctggcgcgcctgacctcgcaactcaagaccttc
gcgcacaagagcgaacttccgctcgcggcggtgccgatggcgcgagccgtggccgacgcg
caggccatcgtggccgaggccacgaagaagaacggcgtcgccatcgaagtcgacgtgcag
cccgcggccctgagcgtcatggccgaagaggccgcgctgggcagcgtactggtcaacctg
atgcgcaacgccatcgacgccatgcaggcctcgccccggcgcacgctgcggctcgaggtg
cggccgcaagagggccgggtgatcctgcgcgtgagcgacaccggaccgggcattccaccc
gacatcctgccgcgcctgttcgagcccttcgtcaccagcaagccggcgggcacgggcctg
gggctcgggctcgcgatctcggcacaattggtgcgggccatggatggcacgctgcgtgcg
gccaacctgccggaaggcggcgcctcattcgtcgtcgacctcccggccgccgtccaggcc
attcttatctccacccctacaggagtgatcaacaagtga
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