Variovorax paradoxus B4: VAPA_2c06640
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Entry
VAPA_2c06640 CDS
T02835
Name
(GenBank) putative sugar ABC transporter, sugar-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c06640
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VAPA_2c06640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c06640
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VAPA_2c06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AGU53222
UniProt:
T1XK26
LinkDB
All DBs
Position
2:complement(681991..682944)
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AA seq
317 aa
AA seq
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MIQRRAATTALVAALIGVPGFAQAQQAQEIYIPLVSKGFQHQFWQAVKSGAEQAAKDLKV
KVTFEGPETEAMVDKQIDMLSAALAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDS
GVDSDIPVTTTTTDNKAAAALAADKMAELIGKSGEVALVVHDQTSRTGVDRRDGFVNRIK
STYPNIKIVSVQYGGGDQLKSTEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRNG
KVVIIGYDSGKQQKNAIIDGSMAGAITQNPVGMGYKTVEMAVKAIKGEKLPKVVDTGFFW
YDKTNIADPKIASVLYD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaagaagagcagccacaaccgcgctggtcgcggccctcatcggcgtgccgggt
tttgcccaggcacagcaggcgcaggagatctacattccgctcgtgtccaagggcttccag
caccagttctggcaggccgtgaagtccggcgccgagcaggccgcgaaggacctgaaggtg
aaggtcactttcgaaggccccgagaccgaggcgatggtcgacaagcagatcgacatgctc
tccgccgcgctcgcgaagaagccgcaggccatcggctttgccgcgctcgacagccaggcc
gccattcccctcctgaagaaggcgcaggccgcgaagattcccgtggtggccttcgactcg
ggcgtggacagcgacatccccgtgaccaccaccaccaccgacaacaaggccgccgcggcg
ctcgcggcggacaagatggccgagctgatcggcaagtcgggcgaggtcgcgctggtggtg
cacgaccagaccagccgcaccggcgtggaccggcgcgacgggttcgtgaaccgcatcaag
tcgacctatccgaacatcaagatcgtgagcgtgcagtacggcggcggcgaccagctgaag
tccaccgagatcaccaagtcgatcctgcaggcctcgccgaacctgaagggcatcttcggc
gccaacgagggctccgccatcggcgtggtcaacggcgtgaaggagatgaagcgcaacggc
aaggtcgtgatcatcggctacgactccggcaagcagcagaagaacgcgatcatcgacggc
agcatggccggcgccatcacgcagaacccggtgggcatgggctacaagacggtggagatg
gcggtgaaggcgatcaagggcgagaagctgcccaaggtggtcgatacgggcttcttctgg
tatgacaagaccaacatcgcagacccgaagatcgcatcggttctttacgactga
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