Variovorax paradoxus B4: VAPA_2c07030
Help
Entry
VAPA_2c07030 CDS
T02835
Name
(GenBank) putative branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c07030
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_2c07030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c07030
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_2c07030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Cytochrom_C
ZnuA
Motif
Other DBs
NCBI-ProteinID:
AGU53260
UniProt:
T1XMB2
LinkDB
All DBs
Position
2:complement(724538..725737)
Genome browser
AA seq
399 aa
AA seq
DB search
MRLTRLYAGFLAATAFTAFCAGASAQDIKLGYNGDLSASPSAQSGQAAVLGMEAAIVDIN
AAGGILGRKLALVTRDDTSAPPKSIQNMSDLVDNEKVAAVFGPTNSGNAMAWKHIANQKK
IPVLGNVGSGTDITKPMSPGADNYMFRVSMVDREQIAALMAYVKKNSAKSKVIGFMAETT
GYGQGGLKDMQEIAELQGIKPAATERFGVGDTDMTSQLSKMKAAGVDTVVVWAQGTPIAQ
LVRSMEKINYFPLTLTSWAADNITFYDAAGKALAEKPIFMRTVGETRTPAQQKLFDRIGS
KLKAPGSFSFALHGYDSVLIYAEAVKQAKTIEGSAVRLALEDLKTPVQGLLKTYDKPFSK
TNHEALTAKDLVWIRWKEGKLMPYSDAMIGSFAPADFKQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagactcacacgcctgtacgccggatttctggccgccactgcattcaccgccttctgt
gcgggcgcctccgcccaggacatcaagctgggctacaacggagacctctccgcatcgcca
tctgcccagagcggccaggcagcggtgctcggcatggaggccgccatcgtcgacatcaac
gcggcgggcggcattctcggccgcaagctcgcactggtcacgcgagacgacacctccgcg
ccacccaagtcgatccagaacatgagcgacctggtcgacaacgagaaggtcgccgccgtg
ttcggccccacgaactcgggtaacgccatggcatggaaacacatcgccaatcaaaagaaa
attccggtgctgggcaacgtgggttcgggcacggacatcaccaagccgatgagcccgggc
gcggacaactacatgttccgcgtgtcgatggtggaccgcgaacagatcgctgcgctgatg
gcctacgtcaagaagaactccgccaagtcgaaggtgatcggcttcatggcggaaaccacc
gggtacgggcagggcgggctgaaggacatgcaggaaatcgccgagctgcagggcatcaag
ccggcggcgaccgagcgcttcggcgtgggcgacaccgacatgacgtcgcaactcagcaag
atgaaggccgcgggcgtggacaccgtggtggtctgggcccagggcacgccgattgcgcag
ctggttcgcagcatggagaagatcaactacttcccgctgaccttgacctcctgggccgcc
gacaacatcaccttctatgacgcggccggcaaggcgctggccgagaagccgatcttcatg
cgcacggtcggcgaaacgcgcacgcccgcccagcaaaagctgttcgatcgcatcggatcc
aagctgaaggcgccgggctccttctcgtttgcgctgcatggctacgactcggtcctgatc
tatgcggaagccgtcaagcaagccaagacgatcgagggatccgcagttcgcctggcgctc
gaggacctgaagacgccggtgcaaggcctgctcaagacctacgacaagccgttcagcaag
accaaccacgaagcgctcaccgccaaggacctggtctggatccgctggaaggagggcaag
ctgatgccctacagcgacgccatgatcggttcgttcgcgccggccgacttcaagcagtaa
DBGET
integrated database retrieval system
